RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 TARSL2A2RTX5 802 aaKnown RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 CTAGE9A4FU28 777 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 APOC4-APOC2K7ER74 178 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 MATN3O15232 486 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 SYNCRIPO60506 623 aaKnown RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 ZNF821O75541 412 aaPredicted RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 APOC2P02655 101 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 HOXB2P14652 356 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 VAV1P15498 845 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 PRLRP16471 622 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 OTUD4Q01804 1114 aaKnown RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 PPIDQ08752 370 aaKnown RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 SLC10A7Q0GE19 358 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 AP1B1Q10567 949 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 KLF1Q13351 362 aaPredicted RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 PDK1Q15118 436 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 CYTH1Q15438 398 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 CRY1Q16526 586 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 HNRNPA1L2Q32P51 320 aaKnown RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 TMEM31Q5JXX7 168 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 PAPD7Q5XG87 772 aaKnown RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 SYT10Q6XYQ8 523 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 B4GALNT4Q76KP1 1039 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 ADAT2Q7Z6V5 191 aaKnown RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 PDCD7Q8N8D1 485 aaKnown RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 ACTL9Q8TC94 416 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 FRS2Q8WU20 508 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 PTPRN2Q92932 1015 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 HDAC11Q96DB2 347 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 MS4A14Q96JA4 679 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 ZNF599Q96NL3 588 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 OLFM3Q96PB7 478 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 NAPGQ99747 312 aaPredicted RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 FAM118BQ9BPY3 351 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 C1QTNF1Q9BXJ1 281 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 PRSS16Q9NQE7 514 aa10.47□□□□□ -0.73
LRRC28-221ENST00000561276 SPATA6Q9NWH7 488 aaPredicted RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 UBA2Q9UBT2 640 aaPredicted RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 FCF1Q9Y324 198 aaKnown RBP10.47□□□□□ -0.73
LRRC28-221ENST00000561276 EDDM13A0A1B0GTR0 161 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 A0A1W2PQF6 199 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 ZNF185O15231 689 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 FANCGO15287 622 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 BNIP3LO60238 219 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 PEX11BO96011 259 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 FGGP02679 453 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 CCNB1P14635 433 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 TCP1P17987 556 aaKnown RBP10.46□□□□□ -0.73
LRRC28-221ENST00000561276 COL9A1P20849 921 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 CASQ1P31415 396 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 DEKP35659 375 aaKnown RBP10.46□□□□□ -0.73
LRRC28-221ENST00000561276 CXCL12P48061 93 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 RENBPP51606 427 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 ZNF33AQ06730 810 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 XRCC4Q13426 336 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 CAMK2GQ13555 558 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-221ENST00000561276 HNRNPDQ14103 355 aaKnown RBP10.46□□□□□ -0.73
LRRC28-221ENST00000561276 RFTN1Q14699 578 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-221ENST00000561276 LBRQ14739 615 aaKnown RBP10.46□□□□□ -0.73
LRRC28-221ENST00000561276 NOMO1Q15155 1222 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 LONRF2Q1L5Z9 754 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 C9orf64Q5T6V5 341 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 MARC1Q5VT66 337 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 TIGD7Q6NT04 549 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-221ENST00000561276 KIAA1211LQ6NV74 962 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 Q6ZVU0 165 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 METTL3Q86U44 580 aaKnown RBP10.46□□□□□ -0.73
LRRC28-221ENST00000561276 CCDC13Q8IYE1 715 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 RASGEF1CQ8N431 466 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 EFCAB3Q8N7B9 438 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 DTWD2Q8NBA8 298 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 TTC13Q8NBP0 860 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 COG1Q8WTW3 980 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 NSMCE1Q8WV22 266 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 TFB1MQ8WVM0 346 aaKnown RBP10.46□□□□□ -0.73
LRRC28-221ENST00000561276 CASKIN2Q8WXE0 1202 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 ISG20Q96AZ6 181 aaKnown RBP10.46□□□□□ -0.73
LRRC28-221ENST00000561276 C16orf45Q96MC5 204 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-221ENST00000561276 IER2Q9BTL4 223 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 BRD8Q9H0E9 1235 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 TNKS2Q9H2K2 1166 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 POLMQ9NP87 494 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-221ENST00000561276 SAR1BQ9Y6B6 198 aa10.46□□□□□ -0.73
LRRC28-221ENST00000561276 MUC3AQ02505 3323 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 HACD1B0YJ81 288 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 H7C0C1 242 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 KCNK1O00180 336 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 CES2O00748 559 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 PPP1R12AO14974 1030 aaPredicted RBP10.45□□□□□ -0.74
LRRC28-221ENST00000561276 MCF2LO15068 1137 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 SIN3BO75182 1162 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 TMCC1O94876 653 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 RBP3P10745 1247 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 ATP5OP48047 213 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 CCR3P51677 355 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 DGKEP52429 567 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 EIF3EP60228 445 aaKnown RBP10.45□□□□□ -0.74
LRRC28-221ENST00000561276 RHOAP61586 193 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 SNRPD1P62314 119 aaKnown RBP10.45□□□□□ -0.74
LRRC28-221ENST00000561276 SATB1Q01826 763 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms