RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 TWNKQ96RR1 684 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 PPP1R9BQ96SB3 815 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 ULBP1Q9BZM6 244 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 UBXN6Q9BZV1 441 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 AGPAT3Q9NRZ7 376 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 GPR27Q9NS67 375 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 ABCC13Q9NSE7 274 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 KLF15Q9UIH9 416 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 PHTF1Q9UMS5 762 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 PCNX1Q96RV3 2341 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 A0A1W2PQM1 296 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 MCF2LO15068 1137 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 YY2O15391 372 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 GCATO75600 419 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 CLDN1O95832 211 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 CD58P19256 250 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 PIK3CAP42336 1068 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 NUMBP49757 651 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 TBX4P57082 545 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 SNRPFP62306 86 aaKnown RBP9.78□□□□□ -0.84
HERC1-210ENST00000560897 MC1RQ01726 317 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 INCA1Q0VD86 236 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 SGCGQ13326 291 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 SLC12A1Q13621 1099 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 ELOCQ15369 112 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 MAP9Q49MG5 647 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 RAB41Q5JT25 222 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 FAXCQ5TGI0 409 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 BSPRYQ5W0U4 402 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 SPOPLQ6IQ16 392 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 Q6ZVU0 165 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 ASB18Q6ZVZ8 466 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 SLC34A3Q8N130 599 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 CFAP52Q8N1V2 620 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 FSTL5Q8N475 847 aaPredicted RBP9.78□□□□□ -0.84
HERC1-210ENST00000560897 Q8N9G6 341 aaPredicted RBP9.78□□□□□ -0.84
HERC1-210ENST00000560897 ERCC4Q92889 916 aaPredicted RBP9.78□□□□□ -0.84
HERC1-210ENST00000560897 AZIN2Q96A70 460 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 PPP1R16AQ96I34 528 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 SLC45A3Q96JT2 553 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 TBATAQ96M53 351 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 LRRC61Q9BV99 259 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 SLC17A9Q9BYT1 436 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 GPN2Q9H9Y4 310 aaPredicted RBP9.78□□□□□ -0.84
HERC1-210ENST00000560897 CYP3A43Q9HB55 503 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 RABGEF1Q9UJ41 708 aa9.78□□□□□ -0.84
HERC1-210ENST00000560897 HIVEP3Q5T1R4 2406 aa9.77□□□□□ -0.84
HERC1-210ENST00000560897 WIPF3A6NGB9 483 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 H3BQV1 296 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 NKX2-8O15522 239 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 PAK4O96013 591 aaPredicted RBP9.77□□□□□ -0.85
HERC1-210ENST00000560897 ALPIP09923 528 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 CTSEP14091 401 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 PDGFRAP16234 1089 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 TSHRP16473 764 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 NR1D1P20393 614 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 STAT6P42226 847 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 BLKP51451 505 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 ZFP36L1Q07352 338 aaKnown RBP9.77□□□□□ -0.85
HERC1-210ENST00000560897 EIF2B5Q13144 721 aaKnown RBP9.77□□□□□ -0.85
HERC1-210ENST00000560897 DLG2Q15700 870 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 ZNF394Q53GI3 561 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 DCAF6Q58WW2 860 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 MS4A13Q5J8X5 152 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 PM20D1Q6GTS8 502 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 ERN2Q76MJ5 926 aaKnown RBP9.77□□□□□ -0.85
HERC1-210ENST00000560897 TMPRSS9Q7Z410 1059 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 ZSCAN30Q86W11 494 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 CCDC13Q8IYE1 715 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 CCDC150Q8NCX0 1101 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 PCDH19Q8TAB3 1148 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 FRS2Q8WU20 508 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 NDRG1Q92597 394 aaKnown RBP9.77□□□□□ -0.85
HERC1-210ENST00000560897 EPSTI1Q96J88 318 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 FEM1CQ96JP0 617 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 TAAR9Q96RI9 348 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 SLC29A3Q9BZD2 475 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 GPR34Q9UPC5 381 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 ZFR2Q9UPR6 939 aaKnown RBP9.77□□□□□ -0.85
HERC1-210ENST00000560897 RNF215Q9Y6U7 377 aa9.77□□□□□ -0.85
HERC1-210ENST00000560897 LRRIQ3A6PVS8 624 aaPredicted RBP9.76□□□□□ -0.85
HERC1-210ENST00000560897 SPTLC2O15270 562 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 SPINT1O43278 529 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 HNRNPRO43390 633 aaKnown RBP9.76□□□□□ -0.85
HERC1-210ENST00000560897 DUX1O43812 170 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 RAD1O60671 282 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 VNN1O95497 513 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 MOCS2O96007 188 aaPredicted RBP9.76□□□□□ -0.85
HERC1-210ENST00000560897 ASS1P00966 412 aaKnown RBP9.76□□□□□ -0.85
HERC1-210ENST00000560897 C4BPAP04003 597 aaKnown RBP9.76□□□□□ -0.85
HERC1-210ENST00000560897 PRNPP04156 253 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 ITGB7P26010 798 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 UGT1A3P35503 534 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 NOP2P46087 812 aaKnown RBP9.76□□□□□ -0.85
HERC1-210ENST00000560897 PPARDQ03181 441 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 ADIGQ0VDE8 80 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 TMEM259Q4ZIN3 620 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 NADSYN1Q6IA69 706 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 TCTN3Q6NUS6 607 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 C16orf46Q6P387 395 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms