RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 RERGQ96A58 199 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 EXOC2Q96KP1 924 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 SNRNP25Q9BV90 132 aaKnown RBP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 DNAJC18Q9H819 358 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 CAB39Q9Y376 341 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 ATP6V1B1P15313 513 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 CDK7P50613 346 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 FASTKQ14296 549 aaKnown RBP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 LBX2Q6XYB7 198 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 CEP68Q76N32 757 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 LRRC49Q8IUZ0 686 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 ETNPPLQ8TBG4 499 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 ASZ1Q8WWH4 475 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 ADAM28Q9UKQ2 775 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 PCDHB9Q9Y5E1 797 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 PCDHGA4Q9Y5G9 962 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 ABL2P42684 1182 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 ITIH4Q14624 930 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 SELENOMQ8WWX9 145 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 PADI3Q9ULW8 664 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 SLC27A6Q9Y2P4 619 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 FTH1P02794 183 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 FYNP06241 537 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 GLUD2P49448 558 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 PPIGQ13427 754 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 FAM98BQ52LJ0 330 aaKnown RBP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 GET4Q7L5D6 327 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 CYP4Z2PQ8N1L4 340 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 KYQ8NBH2 561 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 HSD17B14Q9BPX1 270 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 OPLAHO14841 1288 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 DEFA1P59665 94 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 DEFA3P59666 94 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 IRF8Q02556 426 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 SPRYD7Q5W111 196 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 ARHGAP17Q68EM7 881 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 DNAJC14Q6Y2X3 702 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 OR5B17Q8NGF7 314 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 CENPTQ96BT3 561 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 ABCG4Q9H172 646 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 TBC1D3DA0A087WVF3 549 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 TBC1D3IA0A087WXS9 549 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 TBC1D3EA0A087X179 549 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 TBC1D3KA0A087X1G2 549 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 A0A0B4J269 797 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 TBC1D3FA6NER0 549 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 TBC1D3LB9A6J9 549 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 NEDD8-MDP1E9PL57 170 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 TBC1D3HP0C7X1 549 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 FCGR1AP12314 374 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 PPP1R26Q5T8A7 1209 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 TBC1D3GQ6DHY5 549 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 TBC1D3CQ6IPX1 549 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 TBC1D3Q8IZP1 549 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 CLIP3Q96DZ5 547 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 MYH13Q9UKX3 1938 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 VPS4BO75351 444 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 ELFN1P0C7U0 828 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 UQCRBP14927 111 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 TKTP29401 623 aaKnown RBP13.62□□□□□ -0.23
TRAF3-208ENST00000560371 GPR158Q5T848 1215 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 VSTM1Q6UX27 236 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 NSMCE2Q96MF7 247 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 INPP4BO15327 924 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 UGCGQ16739 394 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 LYPLAL1Q5VWZ2 237 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 TOP6BLQ8N6T0 577 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 POMGNT2Q8NAT1 580 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 NACC2Q96BF6 587 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.62□□□□□ -0.23
TRAF3-208ENST00000560371 DERAQ9Y315 318 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 ASTN1O14525 1302 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 hCG_2014768A0A024R1R8 64 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 CHADO15335 359 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 CALCAP01258 141 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 IFNA16P05015 189 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 NAB1Q13506 487 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 RIPOR1Q6ZS17 1223 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 UTP15Q8TED0 518 aaKnown RBP13.62□□□□□ -0.23
TRAF3-208ENST00000560371 FIG4Q92562 907 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 DNAJC19Q96DA6 116 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 CCDC166P0CW27 439 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 GOT1P17174 413 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 BRCC3P46736 316 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 DYNC1I2Q13409 638 aaKnown RBP13.62□□□□□ -0.23
TRAF3-208ENST00000560371 STXBP5Q5T5C0 1151 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 ABHD15Q6UXT9 468 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 KYAT3Q6YP21 454 aaKnown RBP13.62□□□□□ -0.23
TRAF3-208ENST00000560371 MYCBPAPQ8TBZ2 947 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 PSMC3P17980 439 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 SERPINB3P29508 390 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 S100A3P33764 101 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 PRMT9Q6P2P2 845 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 RNF157Q96PX1 679 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 SNX6Q9UNH7 406 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 ZNF541Q9H0D2 1346 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 YDJCA8MPS7 323 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 CACNB4O00305 520 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms