RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 IGSF6O95976 241 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 CD48P09326 243 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 ACADMP11310 421 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 PRKCHP24723 683 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 ACVRL1P37023 503 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 GARSP41250 739 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 ARF5P84085 180 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 XRCC4Q13426 336 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 SPDYCQ5MJ68 293 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 SEL1L2Q5TEA6 688 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 CCDC181Q5TID7 509 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 NCBP2-AS2Q69YL0 99 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 C22orf39Q6P5X5 142 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 MFSD7Q6UXD7 560 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 TMEM92Q6UXU6 159 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 SLC36A4Q6YBV0 504 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 BBS12Q6ZW61 710 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 USP30Q70CQ3 517 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 SFTPA1Q8IWL2 248 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 ARHGAP12Q8IWW6 846 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 PGBD3Q8N328 593 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 PLD5Q8N7P1 536 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 TMIEQ8NEW7 156 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 HCAR2Q8TDS4 363 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 FRS2Q8WU20 508 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 SORCS1Q8WY21 1168 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 HDAC11Q96DB2 347 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 SIPA1Q96FS4 1042 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 PPP1R16AQ96I34 528 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 GDAP1L1Q96MZ0 367 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 ACOX2Q99424 681 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 OSBPL1AQ9BXW6 950 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 OSBPL8Q9BZF1 889 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 PCED1AQ9H1Q7 454 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 PRSS16Q9NQE7 514 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 TRIM10Q9UDY6 481 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 SEPT3Q9UH03 358 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 NCKAP1Q9Y2A7 1128 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 MFHAS1Q9Y4C4 1052 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 HYOU1Q9Y4L1 999 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 ANKRD36A6QL64 1941 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 hCG_1818297A0A087WSY0 165 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 APOC4-APOC2K7ER74 178 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 MATN3O15232 486 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 SNAP91O60641 907 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 CST8O60676 142 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 NEBLO76041 1014 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 APOC2P02655 101 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 DNTTP04053 509 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 SP9P0CG40 484 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 TDGF1P13385 188 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 C5AR1P21730 350 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 NFKBIAP25963 317 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 DPP6P42658 865 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 CTSOP43234 321 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 SUOXP51687 545 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 RHOAP61586 193 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 MMRN1Q13201 1228 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 CARD16Q5EG05 197 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 C9orf64Q5T6V5 341 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 MARC1Q5VT66 337 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 PKN3Q6P5Z2 889 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 ZSCAN30Q86W11 494 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 TMPRSS6Q8IU80 811 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 REXO1L1PQ8IX06 675 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 NPWQ8N729 165 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 PQLC3Q8N755 202 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 ZBTB44Q8NCP5 570 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 OR2AP1Q8NGE2 309 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 KRT35Q92764 455 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 PTPRN2Q92932 1015 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 TRIM44Q96DX7 344 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 CELF6Q96J87 481 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 MRGPRX1Q96LB2 322 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 PSKH2Q96QS6 385 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 VAT1Q99536 393 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 CPEB1Q9BZB8 566 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 GOLPH3Q9H4A6 298 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 PDFQ9HBH1 243 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 CD248Q9HCU0 757 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 HOMER3Q9NSC5 361 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 DTLQ9NZJ0 730 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 FZD4Q9ULV1 537 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 ZKSCAN5Q9Y2L8 839 aa12.27□□□□□ -0.45
RABGGTA-215ENST00000560207 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 TTC34A8MYJ7 566 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 WASH3PC4AMC7 463 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 SLC7A4O43246 635 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 MAFKO60675 156 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 SIN3BO75182 1162 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 TMCC1O94876 653 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 FTCDO95954 541 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 IGLV3-19P01714 112 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 TUBB4AP04350 444 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 GABRG2P18507 467 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 WASP42768 502 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 STK19P49842 368 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 AP1S1P61966 158 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 PPIDQ08752 370 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 ZNF235Q14590 738 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms