RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 TCP10LQ8TDR4 215 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 FBXO32Q969P5 355 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 TRMT2BQ96GJ1 504 aaKnown RBP18.13■□□□□ 0.49
SNX1-208ENST00000559844 MYRFLQ96LU7 910 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 TTLL2Q9BWV7 592 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 ZNF334Q9HCZ1 680 aaPredicted RBP18.13■□□□□ 0.49
SNX1-208ENST00000559844 ASAH2Q9NR71 780 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 SMYD2Q9NRG4 433 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 OSER1Q9NX31 292 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 CLIC5Q9NZA1 410 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 GMIPQ9P107 970 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 ARHGAP42A6NI28 874 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 TRIM49D1C9J1S8 452 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 PTPN2P17706 415 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 TAF10Q12962 218 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 ZBTB17Q13105 803 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 MARK2Q7KZI7 788 aaKnown RBP18.13■□□□□ 0.49
SNX1-208ENST00000559844 SPATA21Q7Z572 469 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 LRRC49Q8IUZ0 686 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 SLC39A13Q96H72 371 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 CELF6Q96J87 481 aaKnown RBP18.13■□□□□ 0.49
SNX1-208ENST00000559844 SERAC1Q96JX3 654 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 PITPNM3Q9BZ71 974 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 KDM4CQ9H3R0 1056 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 ACTR5Q9H9F9 607 aaPredicted RBP18.13■□□□□ 0.49
SNX1-208ENST00000559844 TLR8Q9NR97 1041 aaKnown RBP18.13■□□□□ 0.49
SNX1-208ENST00000559844 DNMT3BQ9UBC3 853 aaKnown RBP18.13■□□□□ 0.49
SNX1-208ENST00000559844 PRUNE2Q8WUY3 3088 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 WASH4PA8MWX3 477 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 ANKRD65E5RJM6 399 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 POLBP06746 335 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 POU2F2P09086 479 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 CD68P34810 354 aaPredicted RBP18.12■□□□□ 0.49
SNX1-208ENST00000559844 TBX4P57082 545 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 ZKSCAN8Q15776 578 aaPredicted RBP18.12■□□□□ 0.49
SNX1-208ENST00000559844 SPANXN3Q5MJ09 141 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 KCTD11Q693B1 232 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 TIGD7Q6NT04 549 aaPredicted RBP18.12■□□□□ 0.49
SNX1-208ENST00000559844 TRMT10BQ6PF06 316 aaKnown RBP18.12■□□□□ 0.49
SNX1-208ENST00000559844 GRASPQ7Z6J2 395 aaPredicted RBP18.12■□□□□ 0.49
SNX1-208ENST00000559844 AGAP3Q96P47 875 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 PPP1R2P1Q96PQ5 205 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 VPS11Q9H270 941 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 LRRC40Q9H9A6 602 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 CASS4Q9NQ75 786 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 DONSONQ9NYP3 566 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 BFARQ9NZS9 450 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 UXTQ9UBK9 157 aaPredicted RBP18.12■□□□□ 0.49
SNX1-208ENST00000559844 HS3ST4Q9Y661 456 aa18.12■□□□□ 0.49
SNX1-208ENST00000559844 CCT8L1PA6NM43 557 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 E9PAM4 449 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 GOLGA8RI6L899 631 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 DFFAO00273 331 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 PAPLNO95428 1278 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 MOCS2O96007 188 aaPredicted RBP18.11■□□□□ 0.49
SNX1-208ENST00000559844 RHOP08100 348 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 MYL4P12829 197 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 NFKB1P19838 968 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 MAGEA9P43362 315 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 TUBP50607 506 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 NEK3P51956 506 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 MLLT6P55198 1093 aaPredicted RBP18.11■□□□□ 0.49
SNX1-208ENST00000559844 ACBD5Q5T8D3 534 aaPredicted RBP18.11■□□□□ 0.49
SNX1-208ENST00000559844 SH2D5Q6ZV89 423 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 TMC8Q8IU68 726 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 ARHGAP12Q8IWW6 846 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 RTL3Q8N8U3 475 aaKnown RBP18.11■□□□□ 0.49
SNX1-208ENST00000559844 OXNAD1Q96HP4 312 aaPredicted RBP18.11■□□□□ 0.49
SNX1-208ENST00000559844 KLF6Q99612 283 aaPredicted RBP18.11■□□□□ 0.49
SNX1-208ENST00000559844 GORASP1Q9BQQ3 440 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 LRRC3Q9BY71 257 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 SYBUQ9NX95 663 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 MKS1Q9NXB0 559 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 CDH22Q9UJ99 828 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 NUDT5Q9UKK9 219 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 ARL2BPQ9Y2Y0 163 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 JCHAINP01591 159 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 PYGBP11216 843 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 NPY2RP49146 381 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 NTHL1P78549 312 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 DNAJC3Q13217 504 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 CRYMQ14894 314 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 PABPC1LQ4VXU2 614 aaKnown RBP18.11■□□□□ 0.49
SNX1-208ENST00000559844 LACTB2Q53H82 288 aaPredicted RBP18.11■□□□□ 0.49
SNX1-208ENST00000559844 NAPEPLDQ6IQ20 393 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 GPR149Q86SP6 731 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 ATP6V0D2Q8N8Y2 350 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 OR52K1Q8NGK4 314 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 CCT6BQ92526 530 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 IL21Q9HBE4 155 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 STARD13Q9Y3M8 1113 aa18.11■□□□□ 0.49
SNX1-208ENST00000559844 XIRP2A4UGR9 3374 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 MAGEB16A2A368 324 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 COPEO14579 308 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 GABRR2P28476 465 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 CCNFP41002 786 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 NIPAL4Q0D2K0 466 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 MTA1Q13330 715 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 FRG1Q14331 258 aaKnown RBP18.1■□□□□ 0.49
SNX1-208ENST00000559844 TRIP4Q15650 581 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms