RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 TM9SF3Q9HD45 589 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 DNAAF2Q9NVR5 837 aaKnown RBP12.86□□□□□ -0.35
LRRC28-214ENST00000559433 HPCAL4Q9UM19 191 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 CAPN11Q9UMQ6 739 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 BZW2Q9Y6E2 419 aaKnown RBP12.86□□□□□ -0.35
LRRC28-214ENST00000559433 SCINQ9Y6U3 715 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 A0A1B0GVT2 93 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 TMEM191CA6NGB0 347 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 UPK3BL1B0FP48 263 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 UPK3BL2E5RIL1 263 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 KPNA3O00505 521 aaPredicted RBP12.85□□□□□ -0.35
LRRC28-214ENST00000559433 SLC7A4O43246 635 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 PRNPP04156 253 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 GYPCP04921 128 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 SERPING1P05155 500 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 CTSLP07711 333 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 MYBL1P10243 752 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 CHRNA3P32297 505 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 GRIA4P48058 902 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 DNA2P51530 1060 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 CCR5P51681 352 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 SLC20A2Q08357 652 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 CNTN1Q12860 1018 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 SEMA3BQ13214 749 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 POLD3Q15054 466 aaPredicted RBP12.85□□□□□ -0.35
LRRC28-214ENST00000559433 AGBL4Q5VU57 503 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 HGSNATQ68CP4 663 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 VPS36Q86VN1 386 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 ZNF354CQ86Y25 554 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 PCDH20Q8N6Y1 951 aaKnown RBP12.85□□□□□ -0.35
LRRC28-214ENST00000559433 RTL3Q8N8U3 475 aaKnown RBP12.85□□□□□ -0.35
LRRC28-214ENST00000559433 CHST14Q8NCH0 376 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 GRIN3AQ8TCU5 1115 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 SETD7Q8WTS6 366 aaKnown RBP12.85□□□□□ -0.35
LRRC28-214ENST00000559433 ORAI3Q9BRQ5 295 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 ACE2Q9BYF1 805 aaPredicted RBP12.85□□□□□ -0.35
LRRC28-214ENST00000559433 TRIM7Q9C029 511 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 XPO4Q9C0E2 1151 aaKnown RBP12.85□□□□□ -0.35
LRRC28-214ENST00000559433 MAGEH1Q9H213 219 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 OSGEPQ9NPF4 335 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 DYRK4Q9NR20 520 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 GPATCH2LQ9NWQ4 482 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 MYO1AQ9UBC5 1043 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 IL36AQ9UHA7 158 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 TPX2Q9ULW0 747 aaKnown RBP12.85□□□□□ -0.35
LRRC28-214ENST00000559433 FCF1Q9Y324 198 aaKnown RBP12.85□□□□□ -0.35
LRRC28-214ENST00000559433 LUC7L2Q9Y383 392 aaKnown RBP12.85□□□□□ -0.35
LRRC28-214ENST00000559433 DOCK9Q9BZ29 2069 aa12.85□□□□□ -0.35
LRRC28-214ENST00000559433 A0A1W2PPC4 97 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 PLRG1O43660 514 aaKnown RBP12.84□□□□□ -0.35
LRRC28-214ENST00000559433 RNF8O76064 485 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 GEMIN4P57678 1058 aaKnown RBP12.84□□□□□ -0.35
LRRC28-214ENST00000559433 TPI1P60174 286 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 PPP2CBP62714 309 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 PPP2CAP67775 309 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 SIM1P81133 766 aaPredicted RBP12.84□□□□□ -0.35
LRRC28-214ENST00000559433 BNC1Q01954 994 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 FOXC1Q12948 553 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 HLA-BQ31612 363 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 SLC45A4Q5BKX6 768 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 LAYNQ6UX15 382 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 DPY19L3Q6ZPD9 716 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 PRPF39Q86UA1 669 aaKnown RBP12.84□□□□□ -0.35
LRRC28-214ENST00000559433 TMIEQ8NEW7 156 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 FNIP1Q8TF40 1166 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 FAM131CQ96AQ9 280 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 SLC6A18Q96N87 628 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 CNTNAP3BQ96NU0 1288 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 CNTNAP3Q9BZ76 1288 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 ISCUQ9H1K1 167 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 CATSPERBQ9H7T0 1116 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 IL21RQ9HBE5 538 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 MRPL47Q9HD33 250 aaKnown RBP12.84□□□□□ -0.35
LRRC28-214ENST00000559433 AASDHPPTQ9NRN7 309 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 PCSK1NQ9UHG2 260 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 AP4E1Q9UPM8 1137 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 ANKRD6Q9Y2G4 727 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.84□□□□□ -0.35
LRRC28-214ENST00000559433 ACTL7AQ9Y615 435 aa12.84□□□□□ -0.35
LRRC28-214ENST00000559433 CXorf51AA0A1B0GTR3 108 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 FGF10O15520 208 aaPredicted RBP12.83□□□□□ -0.36
LRRC28-214ENST00000559433 CBFA2T2O43439 604 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 KDELR3O43731 214 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 SH3BP5O60239 455 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 PRPSAP2O60256 369 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 ZNF821O75541 412 aaPredicted RBP12.83□□□□□ -0.36
LRRC28-214ENST00000559433 GJB3O75712 270 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 CD59P13987 128 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 CASP14P31944 242 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 HTR7P34969 479 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 RACK1P63244 317 aaKnown RBP12.83□□□□□ -0.36
LRRC28-214ENST00000559433 NFKBIBQ15653 356 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 KIF19Q2TAC6 998 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 CARD16Q5EG05 197 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 ARSIQ5FYB1 569 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 PIP5KL1Q5T9C9 394 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 LEKR1Q6ZMV7 388 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 PIP4P1Q86T03 277 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 ARRDC3Q96B67 414 aa12.83□□□□□ -0.36
LRRC28-214ENST00000559433 PPP1R16AQ96I34 528 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms