RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 CAMK2BQ13554 666 aa20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 SMAD1Q15797 465 aaKnown RBP20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 COL28A1Q2UY09 1125 aa20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 SETMARQ53H47 684 aaPredicted RBP20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 C6orf118Q5T5N4 469 aa20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 LEKR1Q6ZMV7 388 aa20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 DCAF4L2Q8NA75 395 aa20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 GPT2Q8TD30 523 aa20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 RXFP2Q8WXD0 754 aa20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 C11orf70Q9BRQ4 267 aa20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 ATP13A1Q9HD20 1204 aa20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 NDFIP2Q9NV92 336 aa20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 ZNF212Q9UDV6 495 aa20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 IL36AQ9UHA7 158 aa20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 FCF1Q9Y324 198 aaKnown RBP20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 GPSM3Q9Y4H4 160 aa20.95■□□□□ 0.94
TSPAN3-206ENST00000559373 ASXL3Q9C0F0 2248 aa20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 ZNF821O75541 412 aaPredicted RBP20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 LSM8O95777 96 aaKnown RBP20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 EEF1GP26641 437 aaKnown RBP20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 ACVRL1P37023 503 aa20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 SCNN1AP37088 669 aa20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 ARF5P84085 180 aa20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 SEL1L3Q68CR1 1132 aa20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 KANSL1Q7Z3B3 1105 aa20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 BNIPLQ7Z465 357 aa20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 KLHDC7BQ96G42 594 aa20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 ZYG11BQ9C0D3 744 aa20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 PREBQ9HCU5 417 aa20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 DYRK4Q9NR20 520 aa20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 DNAI1Q9UI46 699 aa20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 ZFR2Q9UPR6 939 aaKnown RBP20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 PAXBP1Q9Y5B6 917 aa20.94■□□□□ 0.94
TSPAN3-206ENST00000559373 FAM72CH0Y354 149 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 PRAMEF26H0Y7S4 382 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 RFPL3O75679 317 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 ZMPSTE24O75844 475 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 THEGLP0DJG4 465 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 RECQLP46063 649 aaPredicted RBP20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 ACADVLP49748 655 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 CDR2Q01850 454 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 GNA12Q03113 381 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 ZNF284Q2VY69 593 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 CCDC14Q49A88 953 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 FAM72AQ5TYM5 149 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 FAM72DQ6L9T8 149 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 RWDD4Q6NW29 188 aaKnown RBP20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 FAM72BQ86X60 149 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 NETO2Q8NC67 525 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 MSANTD4Q8NCY6 345 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 TMIEQ8NEW7 156 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 OR6K2Q8NGY2 324 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 ENOX1Q8TC92 643 aaKnown RBP20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 CCDC114Q96M63 670 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 HAPLN3Q96S86 360 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 PCDHB18PQ96TA0 734 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 TM6SF2Q9BZW4 377 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 ERVMER34-1Q9H9K5 563 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 FANCLQ9NW38 375 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 DMTF1Q9Y222 760 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 WASF2Q9Y6W5 498 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 KIF26BQ2KJY2 2108 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 RP1P56715 2156 aa20.93■□□□□ 0.94
TSPAN3-206ENST00000559373 ILVBLA1L0T0 632 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 PRNPP04156 253 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 CYP1A1P04798 512 aaPredicted RBP20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 JUPP14923 745 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 SOX5P35711 763 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 RXRGP48443 463 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 MAPK8IP2Q13387 824 aaPredicted RBP20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 ZNF542PQ5EBM4 170 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 CDKAL1Q5VV42 579 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 ERN2Q76MJ5 926 aaKnown RBP20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 HORMAD1Q86X24 394 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 CCDC185Q8N715 623 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 OR13H1Q8NG92 308 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 CALN1Q9BXU9 219 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 ZDHHC6Q9H6R6 413 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 UCKL1Q9NWZ5 548 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 OR12D3Q9UGF7 316 aa20.92■□□□□ 0.94
TSPAN3-206ENST00000559373 IGSF10Q6WRI0 2623 aa20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 TRIM38O00635 465 aa20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 YKT6O15498 198 aa20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 FFAR2O15552 330 aa20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 CD160O95971 181 aa20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 MYF5P13349 255 aa20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 MMP8P22894 467 aa20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 SERPINH1P50454 418 aaKnown RBP20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 CCNHP51946 323 aaPredicted RBP20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 JAM2P57087 298 aa20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 SFMBT2Q5VUG0 894 aa20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 KDM7AQ6ZMT4 941 aa20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 SLC25A45Q8N413 288 aa20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 RYBPQ8N488 228 aaPredicted RBP20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 TMEM145Q8NBT3 493 aa20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 CRELD1Q96HD1 420 aa20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 PCMTD1Q96MG8 357 aaPredicted RBP20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 TPX2Q9ULW0 747 aaKnown RBP20.91■□□□□ 0.94
TSPAN3-206ENST00000559373 SIGLEC6O43699 453 aa20.9■□□□□ 0.94
TSPAN3-206ENST00000559373 ADRA1BP35368 520 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms