RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 SALL4Q9UJQ4 1053 aa6.05□□□□□ -1.44
USP3-212ENST00000559276 TFR2Q9UP52 801 aa6.05□□□□□ -1.44
USP3-212ENST00000559276 BTBD3Q9Y2F9 522 aa6.05□□□□□ -1.44
USP3-212ENST00000559276 ZNF510Q9Y2H8 683 aa6.05□□□□□ -1.44
USP3-212ENST00000559276 COQ4Q9Y3A0 265 aa6.05□□□□□ -1.44
USP3-212ENST00000559276 GPSM3Q9Y4H4 160 aa6.05□□□□□ -1.44
USP3-212ENST00000559276 ANKRD11Q6UB99 2663 aaPredicted RBP6.05□□□□□ -1.44
USP3-212ENST00000559276 BPTFQ12830 3046 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 A0A087X0T9 212 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 A0A1B0GVT2 93 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 CCT8L1PA6NM43 557 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 MIF4GDA9UHW6 222 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 O00370 1275 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 KRIT1O00522 736 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 KCNK3O14649 394 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 XPO1O14980 1071 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 NPC1O15118 1278 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 BCAT2O15382 392 aaPredicted RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 MSI1O43347 362 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 BUB1O43683 1085 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 TSPAN3O60637 253 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 LUC7L3O95232 432 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 FTCDO95954 541 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 AGTP01019 485 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 CALCAP01258 141 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 IGLV3-27P01718 113 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 FYNP06241 537 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 EPHX1P07099 455 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 H2AFZP0C0S5 128 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 ATXN1LP0C7T5 689 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 FAM228BP0C875 321 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 ZNF883P0CG24 379 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 KRT13P13646 458 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 DRD4P21917 467 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 SLC6A4P31645 630 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 SCTRP47872 440 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 CSNK1EP49674 416 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 MXI1P50539 228 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 POLR2FP61218 127 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 RPS14P62263 151 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 RAPGEF1Q13905 1077 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 HNRNPDQ14103 355 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 STARD3Q14849 445 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 EIF4HQ15056 248 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 UAP1Q16222 522 aaPredicted RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 GOLGA7BQ2TAP0 167 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 FAM133BQ5BKY9 247 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 WDR45BQ5MNZ6 344 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 SYCP2LQ5T4T6 812 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 C6orf118Q5T5N4 469 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 BSPRYQ5W0U4 402 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 NADSYN1Q6IA69 706 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 LAYNQ6UX15 382 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 H2AFVQ71UI9 128 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 TAOK1Q7L7X3 1001 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 PEX26Q7Z412 305 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 CPLX4Q7Z7G2 160 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 FAM124AQ86V42 546 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 SCML4Q8N228 414 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 GPATCH11Q8N954 259 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 OR2T3Q8NH03 318 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 TPCN2Q8NHX9 752 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 LMO3Q8TAP4 145 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 UBA3Q8TBC4 463 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 CLEC4CQ8WTT0 213 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 DDI1Q8WTU0 396 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 CYB5D2Q8WUJ1 264 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 KCTD13Q8WZ19 329 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 EDEM1Q92611 657 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 PRCCQ92733 491 aaPredicted RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 SLC35C1Q96A29 364 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 PLD4Q96BZ4 506 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 SIPA1Q96FS4 1042 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 HES6Q96HZ4 224 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 SPAG5Q96R06 1193 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 CDK5RAP1Q96SZ6 601 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 FMO2Q99518 471 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 IMPG2Q9BZV3 1241 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 ROPN1BQ9BZX4 212 aaPredicted RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 DCLK3Q9C098 648 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 CIPCQ9C0C6 399 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 PABPC3Q9H361 631 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 GAREM1Q9H706 876 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 EBF2Q9HAK2 575 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 ROPN1Q9HAT0 212 aaPredicted RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 PRSS16Q9NQE7 514 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 SAMD15Q9P1V8 674 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 KIAA1522Q9P206 1035 aaPredicted RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 SUSD2Q9UGT4 822 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 TSPAN16Q9UKR8 245 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 INTS6Q9UL03 887 aaKnown RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 SLC12A4Q9UP95 1085 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 LHX6Q9UPM6 363 aa6.04□□□□□ -1.44
USP3-212ENST00000559276 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.04□□□□□ -1.44
USP3-212ENST00000559276 CACNA1GO43497 2377 aa6.03□□□□□ -1.44
USP3-212ENST00000559276 MEI4A8MW99 385 aa6.03□□□□□ -1.44
USP3-212ENST00000559276 TIMM44O43615 452 aa6.03□□□□□ -1.44
USP3-212ENST00000559276 CEP104O60308 925 aa6.03□□□□□ -1.44
USP3-212ENST00000559276 SYNCRIPO60506 623 aaKnown RBP6.03□□□□□ -1.44
USP3-212ENST00000559276 WFS1O76024 890 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms