RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 FAM160B2Q86V87 743 aa11.79□□□□□ -0.52
CASC4-208ENST00000559151 RSRC1Q96IZ7 334 aaKnown RBP11.79□□□□□ -0.52
CASC4-208ENST00000559151 TEFMQ96QE5 360 aaKnown RBP11.79□□□□□ -0.52
CASC4-208ENST00000559151 SNTG1Q9NSN8 517 aa11.79□□□□□ -0.52
CASC4-208ENST00000559151 C20orf141Q9NUB4 165 aa11.79□□□□□ -0.52
CASC4-208ENST00000559151 HAUS2Q9NVX0 235 aa11.79□□□□□ -0.52
CASC4-208ENST00000559151 NRBP1Q9UHY1 535 aa11.79□□□□□ -0.52
CASC4-208ENST00000559151 ING1Q9UK53 422 aaPredicted RBP11.79□□□□□ -0.52
CASC4-208ENST00000559151 LRRC3CA6NJW4 275 aa11.78□□□□□ -0.52
CASC4-208ENST00000559151 FMO4P31512 558 aa11.78□□□□□ -0.52
CASC4-208ENST00000559151 FHL2Q14192 279 aa11.78□□□□□ -0.52
CASC4-208ENST00000559151 ME3Q16798 604 aa11.78□□□□□ -0.52
CASC4-208ENST00000559151 CCDC129Q6ZRS4 1044 aa11.78□□□□□ -0.52
CASC4-208ENST00000559151 PRSS45Q7RTY3 260 aa11.78□□□□□ -0.52
CASC4-208ENST00000559151 CCDC25Q86WR0 208 aa11.78□□□□□ -0.52
CASC4-208ENST00000559151 C8orf58Q8NAV2 365 aa11.78□□□□□ -0.52
CASC4-208ENST00000559151 FAR1Q8WVX9 515 aa11.78□□□□□ -0.52
CASC4-208ENST00000559151 SEPT11Q9NVA2 429 aaKnown RBP11.78□□□□□ -0.52
CASC4-208ENST00000559151 GRHL1Q9NZI5 618 aa11.78□□□□□ -0.52
CASC4-208ENST00000559151 KIAA1456Q9P272 454 aa11.78□□□□□ -0.52
CASC4-208ENST00000559151 AP3D1O14617 1153 aa11.77□□□□□ -0.53
CASC4-208ENST00000559151 IL1AP01583 271 aa11.77□□□□□ -0.53
CASC4-208ENST00000559151 RPL7AP62424 266 aaKnown RBP11.77□□□□□ -0.53
CASC4-208ENST00000559151 EDRF1Q3B7T1 1238 aa11.77□□□□□ -0.53
CASC4-208ENST00000559151 TMEM268Q5VZI3 342 aa11.77□□□□□ -0.53
CASC4-208ENST00000559151 LRIG3Q6UXM1 1119 aa11.77□□□□□ -0.53
CASC4-208ENST00000559151 CYB5R4Q7L1T6 521 aa11.77□□□□□ -0.53
CASC4-208ENST00000559151 USP6NLQ92738 828 aa11.77□□□□□ -0.53
CASC4-208ENST00000559151 MUC13Q9H3R2 512 aa11.77□□□□□ -0.53
CASC4-208ENST00000559151 HIPK3Q9H422 1215 aa11.77□□□□□ -0.53
CASC4-208ENST00000559151 BABAM1Q9NWV8 329 aa11.77□□□□□ -0.53
CASC4-208ENST00000559151 C2CD4BA6NLJ0 364 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 USP12O75317 370 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 NEURL1O76050 574 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 SEC14L2O76054 403 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 CCNDBP1O95273 360 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 IGLV2-14P01704 120 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 RARSP54136 660 aaKnown RBP11.76□□□□□ -0.53
CASC4-208ENST00000559151 SLC12A2P55011 1212 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 TTLL5Q6EMB2 1281 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 KLHL24Q6TFL4 600 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 C11orf65Q8NCR3 313 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 CADM4Q8NFZ8 388 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 NSMCE4AQ9NXX6 385 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 FBXO40Q9UH90 709 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 VPS28Q9UK41 221 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 DMRT1Q9Y5R6 373 aa11.76□□□□□ -0.53
CASC4-208ENST00000559151 ARHGAP10A1A4S6 786 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 FIBPO43427 364 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 WNT1P04628 370 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 BLKP51451 505 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 ARSFP54793 590 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 INHBCP55103 352 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 CYP4A11Q02928 519 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 COL10A1Q03692 680 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 TMEM115Q12893 351 aaPredicted RBP11.75□□□□□ -0.53
CASC4-208ENST00000559151 ZNF268Q14587 947 aaPredicted RBP11.75□□□□□ -0.53
CASC4-208ENST00000559151 BRINP3Q76B58 766 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 WDR5BQ86VZ2 330 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 ADGRF4Q8IZF3 695 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 GDPD5Q8WTR4 605 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 PIMREGQ9BSJ6 248 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 CLIC5Q9NZA1 410 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 LIMA1Q9UHB6 759 aaKnown RBP11.75□□□□□ -0.53
CASC4-208ENST00000559151 KCNE2Q9Y6J6 123 aa11.75□□□□□ -0.53
CASC4-208ENST00000559151 IFNL4K9M1U5 179 aa11.74□□□□□ -0.53
CASC4-208ENST00000559151 TIMM44O43615 452 aa11.74□□□□□ -0.53
CASC4-208ENST00000559151 AHCYL1O43865 530 aa11.74□□□□□ -0.53
CASC4-208ENST00000559151 NFKBIAP25963 317 aa11.74□□□□□ -0.53
CASC4-208ENST00000559151 HOXD13P35453 343 aa11.74□□□□□ -0.53
CASC4-208ENST00000559151 CPOXP36551 454 aa11.74□□□□□ -0.53
CASC4-208ENST00000559151 TBC1D9BQ66K14 1250 aa11.74□□□□□ -0.53
CASC4-208ENST00000559151 CDC73Q6P1J9 531 aa11.74□□□□□ -0.53
CASC4-208ENST00000559151 SLC46A3Q7Z3Q1 461 aa11.74□□□□□ -0.53
CASC4-208ENST00000559151 FAM98AQ8NCA5 519 aaKnown RBP11.74□□□□□ -0.53
CASC4-208ENST00000559151 CENPOQ9BU64 300 aa11.74□□□□□ -0.53
CASC4-208ENST00000559151 SCNM1Q9BWG6 230 aa11.74□□□□□ -0.53
CASC4-208ENST00000559151 CTNNAL1Q9UBT7 734 aa11.74□□□□□ -0.53
CASC4-208ENST00000559151 GTPBP1O00178 669 aaKnown RBP11.73□□□□□ -0.53
CASC4-208ENST00000559151 ALOX12P18054 663 aa11.73□□□□□ -0.53
CASC4-208ENST00000559151 ACVRL1P37023 503 aa11.73□□□□□ -0.53
CASC4-208ENST00000559151 PBX3P40426 434 aa11.73□□□□□ -0.53
CASC4-208ENST00000559151 PROK1P58294 105 aa11.73□□□□□ -0.53
CASC4-208ENST00000559151 MED22Q15528 200 aa11.73□□□□□ -0.53
CASC4-208ENST00000559151 EARS2Q5JPH6 523 aaKnown RBP11.73□□□□□ -0.53
CASC4-208ENST00000559151 SERTAD4-AS1Q5TG53 156 aa11.73□□□□□ -0.53
CASC4-208ENST00000559151 ZNF782Q6ZMW2 699 aaPredicted RBP11.73□□□□□ -0.53
CASC4-208ENST00000559151 IKBIPQ70UQ0 350 aa11.73□□□□□ -0.53
CASC4-208ENST00000559151 GPAT4Q86UL3 456 aa11.73□□□□□ -0.53
CASC4-208ENST00000559151 RUSC2Q8N2Y8 1516 aa11.73□□□□□ -0.53
CASC4-208ENST00000559151 PDILTQ8N807 584 aa11.73□□□□□ -0.53
CASC4-208ENST00000559151 HDAC7Q8WUI4 952 aa11.73□□□□□ -0.53
CASC4-208ENST00000559151 KAT6BQ8WYB5 2073 aa11.73□□□□□ -0.53
CASC4-208ENST00000559151 NUDT16L1Q9BRJ7 211 aaKnown RBP11.73□□□□□ -0.53
CASC4-208ENST00000559151 GLIS2Q9BZE0 524 aaPredicted RBP11.73□□□□□ -0.53
CASC4-208ENST00000559151 ACTR5Q9H9F9 607 aaPredicted RBP11.73□□□□□ -0.53
CASC4-208ENST00000559151 MKLN1Q9UL63 735 aa11.73□□□□□ -0.53
CASC4-208ENST00000559151 LINC01548A6NM66 108 aa11.72□□□□□ -0.53
CASC4-208ENST00000559151 SNAP23O00161 211 aa11.72□□□□□ -0.53
CASC4-208ENST00000559151 EDN2P20800 178 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms