RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 MS4A13Q5J8X5 152 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 DENND5AQ6IQ26 1287 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 CFAP52Q8N1V2 620 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 PSMG2Q969U7 264 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 NSL1Q96IY1 281 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 SERPINB11Q96P15 392 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 CCSER2Q9H7U1 834 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 CREBZFQ9NS37 354 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 SOX13Q9UN79 622 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 PCDHB7Q9Y5E2 793 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 PCDHB5Q9Y5E4 795 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 THSD7BQ9C0I4 1608 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 TK2O00142 265 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 SCAMP3O14828 347 aaKnown RBP10.79□□□□□ -0.68
CUX1-217ENST00000558836 GYG2O15488 501 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 CAPN15O75808 1086 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 ATP5HO75947 161 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 CABYRO75952 493 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 RALBP11234 206 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 PTPN4P29074 926 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 NPY2RP49146 381 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 ATN1P54259 1190 aaPredicted RBP10.79□□□□□ -0.68
CUX1-217ENST00000558836 HTRA3P83110 453 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 COG7P83436 770 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 SLC41A1Q8IVJ1 513 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 TRIM42Q8IWZ5 723 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 RTL3Q8N8U3 475 aaKnown RBP10.79□□□□□ -0.68
CUX1-217ENST00000558836 PTCD3Q96EY7 689 aaKnown RBP10.79□□□□□ -0.68
CUX1-217ENST00000558836 MAN1C1Q9NR34 630 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 SCML2Q9UQR0 700 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 AAR2Q9Y312 384 aaKnown RBP10.79□□□□□ -0.68
CUX1-217ENST00000558836 SH3BP1Q9Y3L3 701 aa10.79□□□□□ -0.68
CUX1-217ENST00000558836 SLC12A8A0AV02 714 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 ERI2A8K979 691 aaKnown RBP10.78□□□□□ -0.68
CUX1-217ENST00000558836 PRR5-ARHGAP8B1AHC4 643 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.78□□□□□ -0.68
CUX1-217ENST00000558836 BIRC5O15392 142 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 PQBP1O60828 265 aaKnown RBP10.78□□□□□ -0.68
CUX1-217ENST00000558836 ALDH2P05091 517 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 CPA3P15088 417 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 SLC11A1P49279 550 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 KCNQ1P51787 676 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 GTF2A1P52655 376 aaPredicted RBP10.78□□□□□ -0.68
CUX1-217ENST00000558836 CCL23P55773 120 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 FAM189BP81408 668 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 ARHGAP8P85298 464 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 NFE2Q16621 373 aaPredicted RBP10.78□□□□□ -0.68
CUX1-217ENST00000558836 DEFB115Q30KQ5 88 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 FBXL22Q6P050 247 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 LDB1Q86U70 411 aaPredicted RBP10.78□□□□□ -0.68
CUX1-217ENST00000558836 ACMSDQ8TDX5 336 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 APBB2Q92870 758 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 MRGPRX2Q96LB1 330 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 RAB3IPQ96QF0 476 aaPredicted RBP10.78□□□□□ -0.68
CUX1-217ENST00000558836 IL12RB2Q99665 862 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 DENND2DQ9H6A0 471 aaPredicted RBP10.78□□□□□ -0.68
CUX1-217ENST00000558836 KCNK4Q9NYG8 393 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 TAS2R1Q9NYW7 299 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 FGF10O15520 208 aaPredicted RBP10.78□□□□□ -0.68
CUX1-217ENST00000558836 ADAM12O43184 909 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 BUD23O43709 281 aaKnown RBP10.78□□□□□ -0.68
CUX1-217ENST00000558836 VNN2O95498 520 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 YWHAQP27348 245 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 ARNTP27540 789 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 CYP2C18P33260 490 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 CD86P42081 329 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 SERPINB8P50452 374 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 RASSF2P50749 326 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 DSC2Q02487 901 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 USP10Q14694 798 aaKnown RBP10.78□□□□□ -0.68
CUX1-217ENST00000558836 PKN3Q6P5Z2 889 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 MAVSQ7Z434 540 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 MFSD6LQ8IWD5 586 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 SCML4Q8N228 414 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 TTC16Q8NEE8 873 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 PIWIL2Q8TC59 973 aaKnown RBP10.78□□□□□ -0.68
CUX1-217ENST00000558836 TSGA13Q96PP4 275 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 FCRL5Q96RD9 977 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 SORT1Q99523 831 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 TASP1Q9H6P5 420 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 HMX1Q9NP08 348 aaPredicted RBP10.78□□□□□ -0.68
CUX1-217ENST00000558836 MARCH2Q9P0N8 246 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 TLR6Q9Y2C9 796 aa10.78□□□□□ -0.68
CUX1-217ENST00000558836 MOXD2PA6NHM9 499 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 MEI4A8MW99 385 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 B2RBV5 119 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 ANP32DO95626 131 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 WNT3AP56704 352 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 RIPK1Q13546 671 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 ZNF789Q5FWF6 425 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 ZC3HC1Q86WB0 502 aaKnown RBP10.77□□□□□ -0.68
CUX1-217ENST00000558836 CEP97Q8IW35 865 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 POU5F2Q8N7G0 328 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 BCL7CQ8WUZ0 217 aaPredicted RBP10.77□□□□□ -0.68
CUX1-217ENST00000558836 KCTD4Q8WVF5 259 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 INPP5DQ92835 1189 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 SGF29Q96ES7 293 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 SLC39A13Q96H72 371 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 CLPTM1LQ96KA5 538 aa10.77□□□□□ -0.68
CUX1-217ENST00000558836 RPRD1AQ96P16 312 aaPredicted RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms