RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 TSR3Q9UJK0 312 aaKnown RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZNF638Q14966 1978 aaKnown RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 CCL16O15467 120 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 DNAJC6O75061 913 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 GLDCP23378 1020 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 SLC8A1P32418 973 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 CTNNB1P35222 781 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 HCAR3P49019 387 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 MGAT5Q09328 741 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZNF177Q13360 481 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 PREPLQ4J6C6 727 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 TIGD7Q6NT04 549 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 FBXO46Q6PJ61 603 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 CDHR3Q6ZTQ4 885 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 DDI1Q8WTU0 396 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 PTPRN2Q92932 1015 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 LRRC39Q96DD0 335 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZNF333Q96JL9 665 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 TSNARE1Q96NA8 513 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 SLC22A12Q96S37 553 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 ACTR5Q9H9F9 607 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 CXXC1Q9P0U4 656 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 AFF4Q9UHB7 1163 aaKnown RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 CDH23Q9H251 3354 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 MATN3O15232 486 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 PHGDHO43175 533 aaKnown RBP10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 TCEA3O75764 348 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 FGF18O76093 207 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 RENBPP51606 427 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 SLC12A2P55011 1212 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 CDK16Q00536 496 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 MRPL58Q14197 206 aaKnown RBP10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 FYB2Q5VWT5 728 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZNF449Q6P9G9 518 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 TBC1D1Q86TI0 1168 aaPredicted RBP10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 NUDCD3Q8IVD9 361 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 PPHLN1Q8NEY8 458 aaKnown RBP10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 SPDL1Q96EA4 605 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 SGF29Q96ES7 293 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 TM6SF2Q9BZW4 377 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 RNF38Q9H0F5 515 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZNF358Q9NW07 568 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 CLIC5Q9NZA1 410 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 SLC2A6Q9UGQ3 507 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 PDCD11Q14690 1871 aaKnown RBP10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 ABHD14A-ACY1A0A1B0GW23 586 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 A0A1W2PRU2 124 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 TLL1O43897 1013 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 RHOQP17081 205 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 EN2P19622 333 aaPredicted RBP10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 KCNA4P22459 653 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 CCNCP24863 283 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 WEE1P30291 646 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 GEMP55040 296 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 PRAMEP78395 509 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 CDH18Q13634 790 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 ANKRD20A4Q4UJ75 823 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 ESRP1Q6NXG1 681 aaKnown RBP10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 PACS1Q6VY07 963 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 CCDC117Q8IWD4 279 aaPredicted RBP10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 SLC22A17Q8WUG5 538 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 ERLEC1Q96DZ1 483 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 VPS28Q9UK41 221 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 TYW5A2RUC4 315 aaKnown RBP10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZNF840PA6NDX5 716 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 ACSL4O60488 711 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 LAG3P18627 525 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 CDC25CP30307 473 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 MPP3Q13368 585 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 PTPRCAPQ14761 206 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 CHI3L2Q15782 390 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 BNIPLQ7Z465 357 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 DENND6AQ8IWF6 608 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 KLHL23Q8NBE8 558 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 EXT2Q93063 718 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 PPP1R36Q96LQ0 422 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 MAGEB18Q96M61 343 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 VAT1Q99536 393 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 UBE2OQ9C0C9 1292 aaKnown RBP10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 MANSC1Q9H8J5 431 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 ABCF3Q9NUQ8 709 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 MCM8Q9UJA3 840 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 GRID1Q9ULK0 1009 aa10.98□□□□□ -0.65
CSPG4P5-201ENST00000558731 C2orf71A6NGG8 1288 aa10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 A8MX80 341 aa10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 INPPL1O15357 1258 aa10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZWINTO95229 277 aa10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 FGBP02675 491 aa10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 TAC1P20366 129 aa10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 SLC6A4P31645 630 aa10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 OXCT1P55809 520 aa10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 USP10Q14694 798 aaKnown RBP10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 EML3Q32P44 896 aa10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZNF470Q6ECI4 717 aa10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 TNS4Q8IZW8 715 aa10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 BBS5Q8N3I7 341 aa10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 ARNTL2Q8WYA1 636 aa10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 MRPS31Q92665 395 aaKnown RBP10.97□□□□□ -0.65
CSPG4P5-201ENST00000558731 WBP2Q969T9 261 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms