RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 TIPINQ9BVW5 301 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 EDEM3Q9BZQ6 932 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 KRT23Q9C075 422 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 CENPHQ9H3R5 247 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 CXorf36Q9H7Y0 433 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 ZWILCHQ9H900 591 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 ATP8A2Q9NTI2 1148 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 GJB4Q9NTQ9 266 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 PAG1Q9NWQ8 432 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 IRAK4Q9NWZ3 460 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 STK32BQ9NY57 414 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 C9orf78Q9NZ63 289 aaPredicted RBP3.42□□□□□ -1.86
HERC1-203ENST00000558532 ADAM22Q9P0K1 906 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 PTGFRNQ9P2B2 879 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 CNOT8Q9UFF9 292 aaKnown RBP3.42□□□□□ -1.86
HERC1-203ENST00000558532 FAM153AQ9UHL3 310 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 BLOC1S6Q9UL45 172 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 NDRG4Q9ULP0 352 aaKnown RBP3.42□□□□□ -1.86
HERC1-203ENST00000558532 TMCO1Q9UM00 188 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 ST3GAL5Q9UNP4 418 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 SHOC2Q9UQ13 582 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 TBC1D30Q9Y2I9 924 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 MRPS17Q9Y2R5 130 aaKnown RBP3.42□□□□□ -1.86
HERC1-203ENST00000558532 RGPD8O14715 1765 aaPredicted RBP3.42□□□□□ -1.86
HERC1-203ENST00000558532 UBR2Q8IWV8 1755 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 ACEP12821 1306 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 MYH10P35580 1976 aa3.42□□□□□ -1.86
HERC1-203ENST00000558532 FRMD3A2A2Y4 597 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 LRRD1A4D1F6 860 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 CFAP69A5D8W1 941 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 DPPA5A6NC42 116 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 GOLGA6L10A6NI86 522 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 SIGLEC16A6NMB1 481 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 TPP1O14773 563 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 CPLX1O14810 134 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 FRS3O43559 492 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 ECE2O60344 883 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 USO1O60763 962 aaKnown RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 DIAPH2O60879 1101 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 PROP1O75360 226 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 CIAO1O76071 339 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 DDX58O95786 925 aaKnown RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 PYGLP06737 847 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 RPSAP08865 295 aaKnown RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 IL6RP08887 468 aaPredicted RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 PARP1P09874 1014 aaKnown RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 ALDH3A1P30838 453 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 HOXC9P31274 260 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 PEX19P40855 299 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 PPP1R2P41236 205 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 PAFAH1B1P43034 410 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 CTCFP49711 727 aaPredicted RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 METAP2P50579 478 aaKnown RBP eCLIP3.41□□□□□ -1.86
HERC1-203ENST00000558532 RBM5P52756 815 aaKnown RBP eCLIP3.41□□□□□ -1.86
HERC1-203ENST00000558532 ATXN1P54253 815 aaKnown RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 SH3BGRP55822 239 aaPredicted RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 TNNC1P63316 161 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 NHLH1Q02575 133 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 TFCP2Q12800 502 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 BNIP1Q12981 228 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 SLC13A2Q13183 592 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 SNX1Q13596 522 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 ACVR2BQ13705 512 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 BMPR2Q13873 1038 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 GCKRQ14397 625 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 SAFBQ15424 915 aaKnown RBP eCLIP3.41□□□□□ -1.86
HERC1-203ENST00000558532 PPP1R7Q15435 360 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 CFAP221Q4G0U5 840 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 HSP90AA4PQ58FG1 418 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 ZNF618Q5T7W0 954 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 TEDDM1Q5T9Z0 273 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 KLHDC7AQ5VTJ3 777 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 DAB2IPQ5VWQ8 1189 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 NUGGCQ68CJ6 796 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 LMBRD2Q68DH5 695 aaPredicted RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 OR52E8Q6IFG1 317 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 IRGCQ6NXR0 463 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 TTI2Q6NXR4 508 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 GGT6Q6P531 493 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 CHST15Q7LFX5 561 aaPredicted RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 TRPM8Q7Z2W7 1104 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 C14orf80Q86SX3 495 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 CROCCP2Q86T23 111 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 ERICH1Q86X53 443 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 MICU3Q86XE3 530 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 DIS3L2Q8IYB7 885 aaKnown RBP3.41□□□□□ -1.86
HERC1-203ENST00000558532 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.41□□□□□ -1.86
HERC1-203ENST00000558532 ADSSL1Q8N142 457 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 USP38Q8NB14 1042 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 FAM156AQ8NDB6 213 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 OR56A3Q8NH54 315 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 TTC8Q8TAM2 541 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 SCFD2Q8WU76 684 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 PPP1R14BQ96C90 147 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 MOGAT1Q96PD6 335 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 TMEM237Q96Q45 408 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 HAPLN3Q96S86 360 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 TSC22D3Q99576 134 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 YIPF3Q9GZM5 350 aa3.41□□□□□ -1.86
HERC1-203ENST00000558532 FAM192AQ9GZU8 254 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms