RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 ARFGAP1Q8N6T3 406 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 PCDH20Q8N6Y1 951 aaKnown RBP8.66□□□□□ -1.02
TPM1-213ENST00000558400 EFCAB3Q8N7B9 438 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 OR7D4Q8NG98 312 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 TEKT4Q8WW24 435 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 LRIG1Q96JA1 1093 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 HSPA12BQ96MM6 686 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 MAGEB5Q9BZ81 275 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 RBSNQ9H1K0 784 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 NEUROG2Q9H2A3 272 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 MTG2Q9H4K7 406 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 LUC7LQ9NQ29 371 aaKnown RBP8.66□□□□□ -1.02
TPM1-213ENST00000558400 CTTNBP2NLQ9P2B4 639 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 ANAPC7Q9UJX3 599 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 NENFQ9UMX5 172 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 SLC6A14Q9UN76 642 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 GON4LQ3T8J9 2241 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 A0A1B0GTW7 788 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.65□□□□□ -1.02
TPM1-213ENST00000558400 ARHGAP42A6NI28 874 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 MEI4A8MW99 385 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 H3BRJ5 948 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 MID1O15344 667 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 BUB1O43683 1085 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 RNASEH2AO75792 299 aaKnown RBP8.65□□□□□ -1.02
TPM1-213ENST00000558400 POP4O95707 220 aaKnown RBP8.65□□□□□ -1.02
TPM1-213ENST00000558400 TMEM253P0C7T8 217 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 ITPKAP23677 461 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 CHRNA3P32297 505 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 ACSL1P33121 698 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 NUDT1P36639 197 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 SERPINH1P50454 418 aaKnown RBP8.65□□□□□ -1.02
TPM1-213ENST00000558400 SNRPD1P62314 119 aaKnown RBP8.65□□□□□ -1.02
TPM1-213ENST00000558400 IRX4P78413 519 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 ZNF252P-AS1Q0IIN9 211 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 DPYSL2Q16555 572 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 TRIM61Q5EBN2 209 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 CARD16Q5EG05 197 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 PPP6R3Q5H9R7 873 aaPredicted RBP8.65□□□□□ -1.02
TPM1-213ENST00000558400 PPM1JQ5JR12 505 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 TMCO4Q5TGY1 634 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 DCAF12L1Q5VU92 463 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 DAB2IPQ5VWQ8 1189 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 NEK5Q6P3R8 708 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 RFX8Q6ZV50 586 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 ARMCX6Q7L4S7 300 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 FAM124AQ86V42 546 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 ZNF354CQ86Y25 554 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 DNAAF5Q86Y56 855 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 LRRC49Q8IUZ0 686 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 SLC41A1Q8IVJ1 513 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 MAP7D3Q8IWC1 876 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 DEFB119Q8N690 84 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 OR2A12Q8NGT7 310 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 OR2T34Q8NGX1 318 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 PIP4K2CQ8TBX8 421 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 ZNF564Q8TBZ8 553 aaPredicted RBP8.65□□□□□ -1.02
TPM1-213ENST00000558400 SKA1Q96BD8 255 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 PPP1R16AQ96I34 528 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 CHP1Q99653 195 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 HEPHQ9BQS7 1158 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 SNRNP25Q9BV90 132 aaKnown RBP8.65□□□□□ -1.02
TPM1-213ENST00000558400 TRIM7Q9C029 511 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 ZDHHC5Q9C0B5 715 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 OSGEPQ9NPF4 335 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 DYRK4Q9NR20 520 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 TMEM74BQ9NUR3 256 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 NDFIP2Q9NV92 336 aa8.65□□□□□ -1.02
TPM1-213ENST00000558400 RCOR3Q9P2K3 495 aaPredicted RBP8.65□□□□□ -1.02
TPM1-213ENST00000558400 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.65□□□□□ -1.02
TPM1-213ENST00000558400 SPAG17Q6Q759 2223 aa8.65□□□□□ -1.03
TPM1-213ENST00000558400 TBC1D3DA0A087WVF3 549 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 TBC1D3IA0A087WXS9 549 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 TBC1D3EA0A087X179 549 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 TBC1D3KA0A087X1G2 549 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 A0A1W2PP55 124 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 TBC1D3FA6NER0 549 aaPredicted RBP8.64□□□□□ -1.03
TPM1-213ENST00000558400 TBC1D3LB9A6J9 549 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 RASA4BC9J798 803 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 K7ERQ8 282 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 SLC30A4O14863 429 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 BCAT2O15382 392 aaPredicted RBP8.64□□□□□ -1.03
TPM1-213ENST00000558400 RASA4O43374 803 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 SMAD6O43541 496 aaKnown RBP8.64□□□□□ -1.03
TPM1-213ENST00000558400 BNIP3LO60238 219 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 PROSCO94903 275 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 KRT7P08729 469 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 TBC1D3HP0C7X1 549 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 RARAP10276 462 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 ERCC2P18074 760 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 CD27P26842 260 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 CYLC1P35663 651 aaPredicted RBP8.64□□□□□ -1.03
TPM1-213ENST00000558400 ACVRL1P37023 503 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 SSR1P43307 286 aaKnown RBP8.64□□□□□ -1.03
TPM1-213ENST00000558400 PSMD8P48556 350 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 DNA2P51530 1060 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 CCR5P51681 352 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 ZNF75DP51815 510 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 ATXN3P54252 364 aaPredicted RBP8.64□□□□□ -1.03
TPM1-213ENST00000558400 ARF5P84085 180 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms