RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 PGK1P00558 417 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 GJB1P08034 283 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 HIRAP54198 1017 aaPredicted RBP14.14□□□□□ -0.15
SPG11-210ENST00000558319 ADAM17P78536 824 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 MFSD7Q6UXD7 560 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 MOB2Q70IA6 237 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 SLC41A1Q8IVJ1 513 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 SLC2A14Q8TDB8 520 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 AENQ8WTP8 325 aaKnown RBP14.14□□□□□ -0.15
SPG11-210ENST00000558319 TP53INP1Q96A56 240 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 CDCA5Q96FF9 252 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 SIPA1Q96FS4 1042 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 CRNNQ9UBG3 495 aaPredicted RBP14.14□□□□□ -0.15
SPG11-210ENST00000558319 PHF11Q9UIL8 331 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 LAMC1P11047 1609 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 A8MUI8 341 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 SAMD4BQ5PRF9 694 aaKnown RBP14.13□□□□□ -0.15
SPG11-210ENST00000558319 ZNF280DQ6N043 979 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.13□□□□□ -0.15
SPG11-210ENST00000558319 DNAJB14Q8TBM8 379 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 ACTRT2Q8TDY3 377 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 SYT15Q9BQS2 421 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 XPNPEP3Q9NQH7 507 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 ITGB1BP2Q9UKP3 347 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 TPP1O14773 563 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 FFAR3O14843 346 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 GPR42O15529 346 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 NOS1APO75052 506 aaPredicted RBP14.13□□□□□ -0.15
SPG11-210ENST00000558319 FXR2P51116 673 aaKnown RBP eCLIP14.13□□□□□ -0.155e-7■■□□□ 11.7
SPG11-210ENST00000558319 RAPSNQ13702 412 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 INSCQ1MX18 579 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 ERMARDQ5T6L9 678 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 TIGD7Q6NT04 549 aaPredicted RBP14.13□□□□□ -0.15
SPG11-210ENST00000558319 IL27RAQ6UWB1 636 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 ACTL9Q8TC94 416 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 ACP6Q9NPH0 428 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 KLHL28Q9NXS3 571 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 KCND2Q9NZV8 630 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 CDH9Q9ULB4 789 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 GMPPBQ9Y5P6 360 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 FFAR2O15552 330 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 VAPBO95292 243 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 SBK1Q52WX2 424 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 SETMARQ53H47 684 aaPredicted RBP14.13□□□□□ -0.15
SPG11-210ENST00000558319 ABRAXAS1Q6UWZ7 409 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 ADARB2Q9NS39 739 aaKnown RBP14.13□□□□□ -0.15
SPG11-210ENST00000558319 UBE2QL1A1L167 161 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 ZNF846Q147U1 533 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 ARHGAP36Q6ZRI8 547 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 EIF3MQ7L2H7 374 aaKnown RBP14.13□□□□□ -0.15
SPG11-210ENST00000558319 NDNQ99608 321 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 GDF3Q9NR23 364 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 ZNF446Q9NWS9 450 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 IKZF3Q9UKT9 509 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 COQ6Q9Y2Z9 468 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 PCDHAC2Q9Y5I4 1007 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 CTPS1P17812 591 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 EPORP19235 508 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 CD151P48509 253 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 NEK3P51956 506 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 CYP24A1Q07973 514 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 C5orf22Q49AR2 442 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 RNF220Q5VTB9 566 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 ULK3Q6PHR2 472 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 FBXO33Q7Z6M2 555 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 EEF1AKMT1Q8WVE0 214 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 TKTL2Q9H0I9 626 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 PTGFRNQ9P2B2 879 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 DRG1Q9Y295 367 aaKnown RBP14.13□□□□□ -0.15
SPG11-210ENST00000558319 COMMD3-BMI1R4GMX3 469 aa14.13□□□□□ -0.15
SPG11-210ENST00000558319 KRT33AO76009 404 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 ADSSP30520 456 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 NT5C2P49902 561 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 FBXO47Q5MNV8 452 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 HPS6Q86YV9 775 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 DENND1CQ8IV53 801 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 FAM20CQ8IXL6 584 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 KLHL23Q8NBE8 558 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 GPR156Q8NFN8 814 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 METTL6Q8TCB7 284 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 TMEM159Q96B96 161 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 RIT2Q99578 217 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 CNPY3Q9BT09 278 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 FAM205AQ6ZU69 1335 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 SPATA31E1Q6ZUB1 1445 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 QRICH2Q9H0J4 1663 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 PIGNO95427 931 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 RARAP10276 462 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 ABL2P42684 1182 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 NAMPTP43490 491 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 EMILIN2Q9BXX0 1053 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 MAT2BQ9NZL9 334 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 CCDC59Q9P031 241 aaKnown RBP14.12□□□□□ -0.15
SPG11-210ENST00000558319 GPC6Q9Y625 555 aaPredicted RBP14.12□□□□□ -0.15
SPG11-210ENST00000558319 PROSCO94903 275 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 KCNH1O95259 989 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 SLC2A3P11169 496 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 AMD1P17707 334 aa14.12□□□□□ -0.15
SPG11-210ENST00000558319 MSX2P35548 267 aaPredicted RBP14.12□□□□□ -0.15
SPG11-210ENST00000558319 CRATP43155 626 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms