RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SLC1A6P48664 564 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 NPY2RP49146 381 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 UBAP2LQ14157 1087 aaKnown RBP10.73□□□□□ -0.69
TPM1-210ENST00000558264 CNGA3Q16281 694 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 ZNF280DQ6N043 979 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 DEFB128Q7Z7B8 93 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 FBXO27Q8NI29 283 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 ZNF398Q8TD17 642 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 APBB2Q92870 758 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 PSMG2Q969U7 264 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 IL12RB2Q99665 862 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 PPP1R12CQ9BZL4 782 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 TLR6Q9Y2C9 796 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 ACTL7AQ9Y615 435 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 SQORQ9Y6N5 450 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 PATJQ8NI35 1801 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 SCAMP3O14828 347 aaKnown RBP10.72□□□□□ -0.69
TPM1-210ENST00000558264 AURKAO14965 403 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 CHUKO15111 745 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 C2P06681 752 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 GABRB3P28472 473 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 HOXC13P31276 330 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 CCR10P46092 362 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 SERPINB8P50452 374 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 DSC2Q02487 901 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 IHHQ14623 411 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 ICE2Q659A1 982 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 FBXL22Q6P050 247 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 FUT10Q6P4F1 479 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 RFWD3Q6PCD5 774 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 RINLQ6ZS11 566 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 TREML1Q86YW5 311 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 SLC41A1Q8IVJ1 513 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 TRIM42Q8IWZ5 723 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 SLC39A13Q96H72 371 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 MRGPRX2Q96LB1 330 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 C8orf48Q96LL4 319 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 PPP1R36Q96LQ0 422 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 RPRD1AQ96P16 312 aaPredicted RBP10.72□□□□□ -0.69
TPM1-210ENST00000558264 TSGA13Q96PP4 275 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 SHCBP1LQ9BZQ2 653 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 FBXO44Q9H4M3 255 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 MARCH2Q9P0N8 246 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 COPG2Q9UBF2 871 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 DCDC2Q9UHG0 476 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 AAR2Q9Y312 384 aaKnown RBP10.72□□□□□ -0.69
TPM1-210ENST00000558264 CDY1Q9Y6F8 540 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 COL4A4P53420 1690 aaPredicted RBP10.72□□□□□ -0.69
TPM1-210ENST00000558264 TMEM189-UBE2V1I3L0A0 370 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 TK2O00142 265 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 ALDH2P05091 517 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 CD86P42081 329 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 KCNQ1P51787 676 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 ZNF135P52742 658 aaPredicted RBP10.72□□□□□ -0.69
TPM1-210ENST00000558264 NAPRTQ6XQN6 538 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 BEND5Q7L4P6 421 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 TMCO2Q7Z6W1 182 aaPredicted RBP10.72□□□□□ -0.69
TPM1-210ENST00000558264 FAM13CQ8NE31 585 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 TTC16Q8NEE8 873 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 ACMSDQ8TDX5 336 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 HHIPL1Q96JK4 782 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 FCRL5Q96RD9 977 aa10.72□□□□□ -0.69
TPM1-210ENST00000558264 H0Y3Z8 333 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 BIRC5O15392 142 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 BUD23O43709 281 aaKnown RBP10.71□□□□□ -0.69
TPM1-210ENST00000558264 AHSGP02765 367 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 CPA3P15088 417 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 GM2AP17900 193 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 ARNTP27540 789 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 ACVRL1P37023 503 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 WNT3AP56704 352 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 KDSRQ06136 332 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 USP4Q13107 963 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 NAB1Q13506 487 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 USP10Q14694 798 aaKnown RBP10.71□□□□□ -0.69
TPM1-210ENST00000558264 ACCSLQ4AC99 568 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 PKN3Q6P5Z2 889 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 MFSD6LQ8IWD5 586 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 SLC43A3Q8NBI5 491 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 TTC8Q8TAM2 541 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 KCNV2Q8TDN2 545 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 PTCD3Q96EY7 689 aaKnown RBP10.71□□□□□ -0.69
TPM1-210ENST00000558264 FUBP3Q96I24 572 aaKnown RBP eCLIP10.71□□□□□ -0.69
TPM1-210ENST00000558264 TACO1Q9BSH4 297 aaKnown RBP10.71□□□□□ -0.69
TPM1-210ENST00000558264 ZYG11BQ9C0D3 744 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 SP110Q9HB58 689 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.71□□□□□ -0.693e-7■■■□□ 15.3
TPM1-210ENST00000558264 THAP1Q9NVV9 213 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 MYLKQ15746 1914 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 SYN3O14994 580 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 ANXA9O76027 345 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 RALBP11234 206 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 ESRRAP11474 423 aaPredicted RBP10.71□□□□□ -0.69
TPM1-210ENST00000558264 PCID2Q5JVF3 399 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 MAVSQ7Z434 540 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 LINC00523Q86TU6 105 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 LDB1Q86U70 411 aaPredicted RBP10.71□□□□□ -0.69
TPM1-210ENST00000558264 ZC3HC1Q86WB0 502 aaKnown RBP10.71□□□□□ -0.69
TPM1-210ENST00000558264 FAM126BQ8IXS8 530 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 KCTD4Q8WVF5 259 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms