RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CLEC17AQ6ZS10 378 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 ERN2Q76MJ5 926 aaKnown RBP14.95□□□□□ -0.02
SHMT2-235ENST00000557740 HORMAD1Q86X24 394 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 SPATS2Q86XZ4 545 aaKnown RBP14.95□□□□□ -0.02
SHMT2-235ENST00000557740 MARCH9Q86YJ5 346 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 PCDH20Q8N6Y1 951 aaKnown RBP14.95□□□□□ -0.02
SHMT2-235ENST00000557740 CHST14Q8NCH0 376 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 PCMTD1Q96MG8 357 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-235ENST00000557740 CEP44Q9C0F1 390 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 LMBRD1Q9NUN5 540 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 PPARGC1AQ9UBK2 798 aaKnown RBP14.95□□□□□ -0.02
SHMT2-235ENST00000557740 CA5BQ9Y2D0 317 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 A0A1W2PQU0 124 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 EPHB6O15197 1021 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 SLC31A1O15431 190 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 LEFTY1O75610 366 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 PCDH8O95206 1070 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 CDK4P11802 303 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 STAT1P42224 750 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 NSFP46459 744 aaKnown RBP14.94□□□□□ -0.02
SHMT2-235ENST00000557740 NEK3P51956 506 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 JAM2P57087 298 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 SLC20A2Q08357 652 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 DNAJC3Q13217 504 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 SYCP1Q15431 976 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 C15orf59Q2T9L4 293 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-235ENST00000557740 ARSIQ5FYB1 569 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 SFMBT2Q5VUG0 894 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 PHLDB2Q86SQ0 1253 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 TMPRSS12Q86WS5 348 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 TMEM145Q8NBT3 493 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 SLC30A5Q8TAD4 765 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 RXFP2Q8WXD0 754 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 KLK6Q92876 244 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 KLHDC7BQ96G42 594 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 HDAC8Q9BY41 377 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 ZNF212Q9UDV6 495 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 OR12D3Q9UGF7 316 aa14.94□□□□□ -0.02
SHMT2-235ENST00000557740 GOLGA4Q13439 2230 aaKnown RBP14.94□□□□□ -0.02
SHMT2-235ENST00000557740 FREM2Q5SZK8 3169 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 SDC3O75056 442 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 ZMPSTE24O75844 475 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 C1SP09871 688 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 THEGLP0DJG4 465 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 CHRNB2P17787 502 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 ADRA1BP35368 520 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 PTPN9P43378 593 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 MAPKAPK2P49137 400 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 ACADVLP49748 655 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 BNIP3Q12983 259 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 ZNF284Q2VY69 593 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 CCDC14Q49A88 953 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 PDCD7Q8N8D1 485 aaKnown RBP14.93□□□□□ -0.02
SHMT2-235ENST00000557740 NEK11Q8NG66 645 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 GPT2Q8TD30 523 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 GBP4Q96PP9 640 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 HEPHQ9BQS7 1158 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 ZDHHC6Q9H6R6 413 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 SEPT11Q9NVA2 429 aaKnown RBP14.93□□□□□ -0.02
SHMT2-235ENST00000557740 FANCLQ9NW38 375 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 DKK4Q9UBT3 224 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 SIK3Q9Y2K2 1263 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 RAXQ9Y2V3 346 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 FCF1Q9Y324 198 aaKnown RBP14.93□□□□□ -0.02
SHMT2-235ENST00000557740 WASF2Q9Y6W5 498 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 COL5A1P20908 1838 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-235ENST00000557740 DMXL2Q8TDJ6 3036 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 SPEGQ15772 3267 aa14.93□□□□□ -0.02
SHMT2-235ENST00000557740 TRABD2BA6NFA1 517 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 C2CD4BA6NLJ0 364 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 CALB1P05937 261 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 KRT3P12035 628 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 ADRB3P13945 408 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 JUPP14923 745 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 RHOQP17081 205 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 HNRNPA2B1P22626 353 aaKnown RBP14.92□□□□□ -0.02
SHMT2-235ENST00000557740 ITGB7P26010 798 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 CCNHP51946 323 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-235ENST00000557740 COPB1P53618 953 aaKnown RBP14.92□□□□□ -0.02
SHMT2-235ENST00000557740 GEMIN4P57678 1058 aaKnown RBP14.92□□□□□ -0.02
SHMT2-235ENST00000557740 ARF5P84085 180 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 MYL5Q02045 173 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 NRG1Q02297 640 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-235ENST00000557740 RAB6CQ53S08 254 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 HS1BP3Q53T59 392 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 CARD16Q5EG05 197 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 ARTNQ5T4W7 220 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 MANEALQ5VSG8 457 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 SEL1L3Q68CR1 1132 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 FBXL19Q6PCT2 694 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 SASS6Q6UVJ0 657 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 STRADAQ7RTN6 431 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 RYBPQ8N488 228 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-235ENST00000557740 JOSD2Q8TAC2 188 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 TBC1D31Q96DN5 1066 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 SELENOOQ9BVL4 669 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 CALN1Q9BXU9 219 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 TM6SF2Q9BZW4 377 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 RAB6CQ9H0N0 254 aa14.92□□□□□ -0.02
SHMT2-235ENST00000557740 RETREG1Q9H6L5 497 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms