RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 LRRC69Q6ZNQ3 347 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 BNIPLQ7Z465 357 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 CIR1Q86X95 450 aaPredicted RBP17.06■□□□□ 0.32
NEK9-211ENST00000557673 OXR1Q8N573 874 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 ATP6V0D2Q8N8Y2 350 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 RNF34Q969K3 372 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 PGAP3Q96FM1 320 aaPredicted RBP17.06■□□□□ 0.32
NEK9-211ENST00000557673 MYO19Q96H55 970 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 CCDC42Q96M95 316 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 CFAP57Q96MR6 1250 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 DCBLD2Q96PD2 775 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 TBCBQ99426 244 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 PRMT1Q99873 361 aaKnown RBP17.06■□□□□ 0.32
NEK9-211ENST00000557673 SPTLC3Q9NUV7 552 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 PARVAQ9NVD7 372 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 CNOT8Q9UFF9 292 aaKnown RBP17.06■□□□□ 0.32
NEK9-211ENST00000557673 INTS6Q9UL03 887 aaKnown RBP17.06■□□□□ 0.32
NEK9-211ENST00000557673 GCN1Q92616 2671 aaKnown RBP17.06■□□□□ 0.32
NEK9-211ENST00000557673 GOLGA6L6A8MZA4 724 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 F5H5T6 163 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 M0QYT0 321 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 SLC2A3P11169 496 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 GOT1P17174 413 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 SDC4P31431 198 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 SLC8A1P32418 973 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 RFC1P35251 1148 aaPredicted RBP17.05■□□□□ 0.32
NEK9-211ENST00000557673 GGCXP38435 758 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 NNMTP40261 264 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 PTPN9P43378 593 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 ECT2LQ008S8 904 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 MAMLD1Q13495 774 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 C9orf64Q5T6V5 341 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 SND1Q7KZF4 910 aaKnown RBP eCLIP17.05■□□□□ 0.32
NEK9-211ENST00000557673 GATAD2AQ86YP4 633 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 MMAAQ8IVH4 418 aaKnown RBP17.05■□□□□ 0.32
NEK9-211ENST00000557673 SAP25Q8TEE9 199 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 RXFP2Q8WXD0 754 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 BBC3Q96PG8 261 aaPredicted RBP17.05■□□□□ 0.32
NEK9-211ENST00000557673 THAP2Q9H0W7 228 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 MTG2Q9H4K7 406 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 PIGVQ9NUD9 493 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 SLC12A6Q9UHW9 1150 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 ERVW-1Q9UQF0 538 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 SCINQ9Y6U3 715 aa17.05■□□□□ 0.32
NEK9-211ENST00000557673 TMEM131Q92545 1883 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 TK2O00142 265 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 RRP8O43159 456 aaKnown RBP17.04■□□□□ 0.32
NEK9-211ENST00000557673 GPD1P21695 349 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 C5AR1P21730 350 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 RPL7AP62424 266 aaKnown RBP17.04■□□□□ 0.32
NEK9-211ENST00000557673 ILKQ13418 452 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 PITRM1Q5JRX3 1037 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 PRAMEF14Q5SWL7 426 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 TMEM139Q8IV31 216 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 OR14C36Q8NHC7 312 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 SERAC1Q96JX3 654 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 MRGPRX3Q96LB0 322 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 PACSIN1Q9BY11 444 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 NRSN2Q9GZP1 204 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 ERVMER34-1Q9H9K5 563 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 SERGEFQ9UGK8 458 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 AK5Q9Y6K8 562 aa17.04■□□□□ 0.32
NEK9-211ENST00000557673 COL5A1P20908 1838 aaPredicted RBP17.04■□□□□ 0.32
NEK9-211ENST00000557673 DOCK4Q8N1I0 1966 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 ANKRD62A6NC57 917 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 TLR4O00206 839 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 MAGEC1O60732 1142 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 CYP1A2P05177 515 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 PDGFRAP16234 1089 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 NUDT1P36639 197 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 CTSOP43234 321 aaPredicted RBP17.03■□□□□ 0.32
NEK9-211ENST00000557673 NUMBP49757 651 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 IRAK1P51617 712 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 GSDMDP57764 484 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 OGDHQ02218 1023 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 C19orf57Q0VDD7 668 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 ELAVL3Q14576 367 aaKnown RBP17.03■□□□□ 0.32
NEK9-211ENST00000557673 C15orf59Q2T9L4 293 aaPredicted RBP17.03■□□□□ 0.32
NEK9-211ENST00000557673 CCDC14Q49A88 953 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 FBXL22Q6P050 247 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 DCUN1D2Q6PH85 259 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 CCDC170Q8IYT3 715 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 CCAR2Q8N163 923 aaKnown RBP17.03■□□□□ 0.32
NEK9-211ENST00000557673 EID2Q8N6I1 236 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 ARHGEF26Q96DR7 871 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 KDM4CQ9H3R0 1056 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 EBF2Q9HAK2 575 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 ANLNQ9NQW6 1124 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 MYO1AQ9UBC5 1043 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 HS3ST4Q9Y661 456 aa17.03■□□□□ 0.32
NEK9-211ENST00000557673 TBC1D3DA0A087WVF3 549 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 TBC1D3IA0A087WXS9 549 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 TBC1D3EA0A087X179 549 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 TBC1D3KA0A087X1G2 549 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 A0A1W2PR77 199 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 TBC1D3FA6NER0 549 aaPredicted RBP17.02■□□□□ 0.32
NEK9-211ENST00000557673 SOWAHDA6NJG2 315 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 TTC34A8MYJ7 566 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 TBC1D3LB9A6J9 549 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 CCP110O43303 1012 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms