RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 VAV1P15498 845 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 GOT1P17174 413 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 TGM1P22735 817 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 GLDCP23378 1020 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 IL1R2P27930 398 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 CDC25BP30305 580 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 HOXD12P35452 270 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 ARHGAP25P42331 645 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 PI4KAP42356 2102 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 SSR1P43307 286 aaKnown RBP12.75□□□□□ -0.37
SLIRP-211ENST00000557623 PSMD8P48556 350 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 NDST2P52849 883 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 SLC25A11Q02978 314 aaKnown RBP12.75□□□□□ -0.37
SLIRP-211ENST00000557623 LMNB2Q03252 620 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 SPA17Q15506 151 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 SMTNL2Q2TAL5 461 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 KCNT1Q5JUK3 1230 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 WDR45BQ5MNZ6 344 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 PLA2G2CQ5R387 149 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 DAB2IPQ5VWQ8 1189 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 C22orf39Q6P5X5 142 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 PRR23CQ6ZRP0 262 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 Q6ZVU0 165 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 ARMCX6Q7L4S7 300 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 SDK1Q7Z5N4 2213 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 RABEPKQ7Z6M1 372 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 FAM124AQ86V42 546 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 SYT12Q8IV01 421 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 PCDH20Q8N6Y1 951 aaKnown RBP12.75□□□□□ -0.37
SLIRP-211ENST00000557623 C12orf50Q8NA57 414 aaPredicted RBP12.75□□□□□ -0.37
SLIRP-211ENST00000557623 SLC35G2Q8TBE7 412 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 CASKIN2Q8WXE0 1202 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 HSPH1Q92598 858 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 PIGKQ92643 395 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 VPS13AQ96RL7 3174 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 OMDQ99983 421 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 GPR174Q9BXC1 333 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 PARD6AQ9NPB6 346 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 FBXL12Q9NXK8 326 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 FZD4Q9ULV1 537 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 DMDP11532 3685 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 A0A1W2PP55 124 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 ARHGAP42A6NI28 874 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 MEI4A8MW99 385 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 GOLGA6L6A8MZA4 724 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 PRR5-ARHGAP8B1AHC4 643 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 RASA4BC9J798 803 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 K7ERQ8 282 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 KHNYNO15037 678 aaKnown RBP12.74□□□□□ -0.37
SLIRP-211ENST00000557623 RASA4O43374 803 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 SMAD6O43541 496 aaKnown RBP12.74□□□□□ -0.37
SLIRP-211ENST00000557623 BNIP3LO60238 219 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 MTA2O94776 668 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 LCA5LO95447 670 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 SEMA4FO95754 770 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 PRNPP04156 253 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 KRT7P08729 469 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 ERCC2P18074 760 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 MAN1A1P33908 653 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 PTGER3P43115 390 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 MAGEA1P43355 309 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 ARHGAP8P85298 464 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 CCDC15Q0P6D6 951 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 TMTC1Q8IUR5 882 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 SLC41A1Q8IVJ1 513 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 RGL4Q8IZJ4 473 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 LZTR1Q8N653 840 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 DEFB119Q8N690 84 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 OR2A12Q8NGT7 310 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 CEP76Q8TAP6 659 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 RFFLQ8WZ73 363 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 ISG20Q96AZ6 181 aaKnown RBP12.74□□□□□ -0.37
SLIRP-211ENST00000557623 HSPA12BQ96MM6 686 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 NOL6Q9H6R4 1146 aaKnown RBP12.74□□□□□ -0.37
SLIRP-211ENST00000557623 OSGEPQ9NPF4 335 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.74□□□□□ -0.37
SLIRP-211ENST00000557623 CWC15Q9P013 229 aaKnown RBP12.74□□□□□ -0.37
SLIRP-211ENST00000557623 IMPACTQ9P2X3 320 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 TSR3Q9UJK0 312 aaKnown RBP12.74□□□□□ -0.37
SLIRP-211ENST00000557623 PILRBQ9UKJ0 227 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 PPM1HQ9ULR3 514 aa12.74□□□□□ -0.37
SLIRP-211ENST00000557623 ZFHX2Q9C0A1 2572 aaPredicted RBP12.74□□□□□ -0.37
SLIRP-211ENST00000557623 NUMA1Q14980 2115 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 SHROOM3Q8TF72 1996 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 RCCD1A6NED2 376 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 METTL12A8MUP2 240 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 SLC7A4O43246 635 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 BUB1O43683 1085 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 RNASEH2AO75792 299 aaKnown RBP12.73□□□□□ -0.37
SLIRP-211ENST00000557623 IPO7O95373 1038 aaKnown RBP12.73□□□□□ -0.37
SLIRP-211ENST00000557623 GNSP15586 552 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 TCF4P15884 667 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 SDHBP21912 280 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 ITPKAP23677 461 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 CHRNA3P32297 505 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 ACSL1P33121 698 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 SNRPD1P62314 119 aaKnown RBP12.73□□□□□ -0.37
SLIRP-211ENST00000557623 SERINC3Q13530 473 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 KRT81Q14533 505 aa12.73□□□□□ -0.37
SLIRP-211ENST00000557623 TCEAL1Q15170 157 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms