RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 USP12O75317 370 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 AFPP02771 609 aaKnown RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 TUBBP07437 444 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 ADH4P08319 380 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 RFPL3SP0C7P2 107 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 EBLN1P0CF75 366 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 EDN2P20800 178 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 SAT1P21673 171 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 MUTP22033 750 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 SLC15A1P46059 708 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 NRIP1P48552 1158 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 HSD17B4P51659 736 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 ADPRHP54922 357 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 ZXDAP98168 799 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 CFHR3Q02985 330 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 ZBTB16Q05516 673 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 CSTF3Q12996 717 aaKnown RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 AIMP2Q13155 320 aaKnown RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 SCARB2Q14108 478 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 ICAM4Q14773 271 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 NTRK2Q16620 822 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 KYNUQ16719 465 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 ERCC6LQ2NKX8 1250 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 TBC1D25Q3MII6 688 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 PLAC9Q5JTB6 97 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 SERTAD4-AS1Q5TG53 156 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 GARNL3Q5VVW2 1013 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 NUGGCQ68CJ6 796 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 KIAA0930Q6ICG6 404 aaPredicted RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 TSSK4Q6SA08 328 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 USP51Q70EK9 711 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 ZNF551Q7Z340 670 aaPredicted RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 WDR53Q7Z5U6 358 aaPredicted RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 NEK8Q86SG6 692 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 GPAT4Q86UL3 456 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 LINC01465Q8N7H1 131 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 POC5Q8NA72 575 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 ZBTB8BQ8NAP8 495 aaPredicted RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 SLC25A43Q8WUT9 341 aaPredicted RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 PSPC1Q8WXF1 523 aaKnown RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 GTF3C6Q969F1 213 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 SLC22A18Q96BI1 424 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 MMABQ96EY8 250 aaPredicted RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 MYEOVQ96EZ4 313 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 SAT2Q96F10 170 aaPredicted RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 NAF1Q96HR8 494 aaKnown RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 ZNF845Q96IR2 970 aaPredicted RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 ADAD1Q96M93 576 aaKnown RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 MAP7D2Q96T17 732 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 THAP7Q9BT49 309 aaPredicted RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 TEX12Q9BXU0 123 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 TRIM2Q9C040 744 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 ZWILCHQ9H900 591 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 GRPEL1Q9HAV7 217 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 Q9N2J8 555 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 ENTPD7Q9NQZ7 604 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 NCKIPSDQ9NZQ3 722 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 CPSF2Q9P2I0 782 aaKnown RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 ANKFY1Q9P2R3 1169 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 NLKQ9UBE8 527 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 DHDHQ9UQ10 334 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 PTRH2Q9Y3E5 179 aaKnown RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 HEMK1Q9Y5R4 338 aaPredicted RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 SESN1Q9Y6P5 492 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 SOS1Q07889 1333 aaPredicted RBP3.32□□□□□ -1.88
TRAV28-201ENST00000557548 RPGRIP1LQ68CZ1 1315 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 CENPVL1A0A0U1RR11 272 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 ARHGAP10A1A4S6 786 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 OR6C68A6NDL8 312 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 TTC36A6NLP5 189 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 KCNJ18B7U540 433 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 CLIC1O00299 241 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 QSOX1O00391 747 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 PRICKLE3O43900 615 aaPredicted RBP3.31□□□□□ -1.88
TRAV28-201ENST00000557548 TBX10O75333 385 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 TBCAO75347 108 aaKnown RBP3.31□□□□□ -1.88
TRAV28-201ENST00000557548 PRR35P0CG20 571 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 FCGR2AP12318 317 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 KRT10P13645 584 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 SELLP14151 372 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 NDUFB7P17568 137 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 GABRB1P18505 474 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 TGM2P21980 687 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 FOLR3P41439 243 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 TNNT3P45378 269 aaPredicted RBP3.31□□□□□ -1.88
TRAV28-201ENST00000557548 PIP4K2AP48426 406 aaPredicted RBP3.31□□□□□ -1.88
TRAV28-201ENST00000557548 LMAN1P49257 510 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 ZNF84P51523 738 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 F2RL1P55085 397 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 RRP1P56182 461 aaKnown RBP3.31□□□□□ -1.88
TRAV28-201ENST00000557548 EEFSECP57772 596 aaKnown RBP3.31□□□□□ -1.88
TRAV28-201ENST00000557548 SLC25A3Q00325 362 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 PLIN5Q00G26 463 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 CYP4A11Q02928 519 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 PPARDQ03181 441 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 NIPAL4Q0D2K0 466 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 TNFAIP1Q13829 316 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 SEMA3AQ14563 771 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 KCNB1Q14721 858 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 PCLAFQ15004 111 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms