RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 OR7D4Q8NG98 312 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 NSMCE1Q8WV22 266 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 TEKT4Q8WW24 435 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 CASKIN2Q8WXE0 1202 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 PIGKQ92643 395 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 TOE1Q96GM8 510 aaKnown RBP8.51□□□□□ -1.05
PSEN1-223ENST00000557511 PPP1R16AQ96I34 528 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 MRGPRX3Q96LB0 322 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 PANX2Q96RD6 677 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 CHP1Q99653 195 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 SNRNP25Q9BV90 132 aaKnown RBP8.51□□□□□ -1.05
PSEN1-223ENST00000557511 C1QTNF2Q9BXJ5 285 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 NUSAP1Q9BXS6 441 aaKnown RBP8.51□□□□□ -1.05
PSEN1-223ENST00000557511 CEP44Q9C0F1 390 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 MKRN2Q9H000 416 aaKnown RBP8.51□□□□□ -1.05
PSEN1-223ENST00000557511 RAB6CQ9H0N0 254 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 DUSP15Q9H1R2 295 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-223ENST00000557511 SLC6A17Q9H1V8 727 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 RSPH9Q9H1X1 276 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-223ENST00000557511 SGK2Q9HBY8 427 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.51□□□□□ -1.05
PSEN1-223ENST00000557511 GPATCH2LQ9NWQ4 482 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 FBXL12Q9NXK8 326 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 IMPACTQ9P2X3 320 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 SUSD2Q9UGT4 822 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 VPS51Q9UID3 782 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 INTUQ9ULD6 942 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 HS3ST2Q9Y278 367 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 CACNA1IQ9P0X4 2223 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 A0A0D9SEW6 157 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 LRRC72A6NJI9 287 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 WASH4PA8MWX3 477 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 PRR5-ARHGAP8B1AHC4 643 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 FAM72CH0Y354 149 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 I6L893 689 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 KHNYNO15037 678 aaKnown RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 CAPN5O15484 640 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 BUB1O43683 1085 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 SNAP91O60641 907 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 RNASEH2AO75792 299 aaKnown RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 PROSCO94903 275 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 SRCP12931 536 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 C5AR1P21730 350 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 BCKDHBP21953 392 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 SLC8A1P32418 973 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 SERPINB6P35237 376 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 GJC1P36383 396 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 MPLP40238 635 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 ARHGAP25P42331 645 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 HCAR3P49019 387 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 SMCPP49901 116 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 SERPINH1P50454 418 aaKnown RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 TPMTP51580 245 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 NDST2P52849 883 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 ATXN3P54252 364 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 NAP1L1P55209 391 aaKnown RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 CDH6P55285 790 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 RPS14P62263 151 aaKnown RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 SNRPD1P62314 119 aaKnown RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 ARHGAP8P85298 464 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 ZNF33AQ06730 810 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 MESDQ14696 234 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 CST6Q15828 149 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 CSRP2Q16527 193 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 SMTNL2Q2TAL5 461 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 KCNT1Q5JUK3 1230 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 C9orf64Q5T6V5 341 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 FAM72AQ5TYM5 149 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 ZNF787Q6DD87 383 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 FAM72DQ6L9T8 149 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 C22orf39Q6P5X5 142 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 TMCO3Q6UWJ1 677 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 LINGO4Q6UY18 593 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 RFX8Q6ZV50 586 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 Q6ZVU0 165 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 USP30Q70CQ3 517 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 NLRP14Q86W24 1093 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 FAM72BQ86X60 149 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 GAS2L3Q86XJ1 694 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 KIAA2013Q8IYS2 634 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 STK40Q8N2I9 435 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 BBS5Q8N3I7 341 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 DCLK2Q8N568 766 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 LZTR1Q8N653 840 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 PCDH20Q8N6Y1 951 aaKnown RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 TC2NQ8N9U0 490 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 KCTD6Q8NC69 237 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 CADM4Q8NFZ8 388 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 CEP76Q8TAP6 659 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 RFFLQ8WZ73 363 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 SNX19Q92543 992 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 ANP32BQ92688 251 aaKnown RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 ARHGEF2Q92974 986 aaKnown RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 ARHGEF26Q96DR7 871 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 ALG14Q96F25 216 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 CALR3Q96L12 384 aaKnown RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 GPR174Q9BXC1 333 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 TRIM7Q9C029 511 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 PCED1AQ9H1Q7 454 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 PABPC3Q9H361 631 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms