RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 GRIN3AQ8TCU5 1115 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 ZNF606Q8WXB4 792 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 BMFQ96LC9 184 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 CEP63Q96MT8 703 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 SLC2A13Q96QE2 648 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 HDAC8Q9BY41 377 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 SLC17A9Q9BYT1 436 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 ACP6Q9NPH0 428 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 HS3ST3A1Q9Y663 406 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 PIEZO2Q9H5I5 2752 aa12.59□□□□□ -0.39
SNX6-209ENST00000557265 TP53BP1Q12888 1972 aaPredicted RBP12.58□□□□□ -0.4
SNX6-209ENST00000557265 SPTY2D1-AS1A0A0U1RR47 76 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 POM121BA6NF01 834 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 PSMA7O14818 248 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 THAP12O43422 761 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 SLC28A2O43868 658 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 LZTS3O60299 673 aaPredicted RBP12.58□□□□□ -0.4
SNX6-209ENST00000557265 PAGE1O75459 146 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 GRAP2O75791 330 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 CNTN5O94779 1100 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 ENDOD1O94919 500 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 SMC2O95347 1197 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 PAK4O96013 591 aaPredicted RBP12.58□□□□□ -0.4
SNX6-209ENST00000557265 CSF2P04141 144 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 GLI1P08151 1106 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 CDH4P55283 916 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 MTA1Q13330 715 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 EFHC1Q5JVL4 640 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 ZCCHC8Q6NZY4 707 aaKnown RBP12.58□□□□□ -0.4
SNX6-209ENST00000557265 GUSBP11Q6P575 273 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 FOXR1Q6PIV2 292 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 CRTC1Q6UUV9 634 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 LINGO4Q6UY18 593 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 EFL1Q7Z2Z2 1120 aaKnown RBP12.58□□□□□ -0.4
SNX6-209ENST00000557265 FMR1NBQ8N0W7 255 aaPredicted RBP12.58□□□□□ -0.4
SNX6-209ENST00000557265 FAM174AQ8TBP5 190 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 GRAMD1AQ96CP6 724 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 CCDC97Q96F63 343 aaPredicted RBP12.58□□□□□ -0.4
SNX6-209ENST00000557265 PRR11Q96HE9 360 aaPredicted RBP12.58□□□□□ -0.4
SNX6-209ENST00000557265 PSMB7Q99436 277 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 C2orf49Q9BVC5 232 aaPredicted RBP12.58□□□□□ -0.4
SNX6-209ENST00000557265 GTPBP4Q9BZE4 634 aaKnown RBP12.58□□□□□ -0.4
SNX6-209ENST00000557265 INTS2Q9H0H0 1204 aaKnown RBP12.58□□□□□ -0.4
SNX6-209ENST00000557265 SIK2Q9H0K1 926 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 TNKS2Q9H2K2 1166 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 GDPD2Q9HCC8 539 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 UBE2TQ9NPD8 197 aaPredicted RBP12.58□□□□□ -0.4
SNX6-209ENST00000557265 GPR27Q9NS67 375 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 NCKIPSDQ9NZQ3 722 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 IL36AQ9UHA7 158 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 IPO11Q9UI26 975 aaKnown RBP12.58□□□□□ -0.4
SNX6-209ENST00000557265 VPS51Q9UID3 782 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 KLF15Q9UIH9 416 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 ENTPD2Q9Y5L3 495 aa12.58□□□□□ -0.4
SNX6-209ENST00000557265 PMS2P1A4D2B8 440 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 H3BM21 787 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 RAD51BO15315 384 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 ARHGAP6O43182 974 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 HSF2BPO75031 334 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 LEFTY1O75610 366 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 WISP1O95388 367 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 RHOCP08134 193 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 NME1P15531 152 aaKnown RBP12.57□□□□□ -0.4
SNX6-209ENST00000557265 GNA15P30679 374 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 RECQLP46063 649 aaPredicted RBP12.57□□□□□ -0.4
SNX6-209ENST00000557265 RPS21P63220 83 aaKnown RBP12.57□□□□□ -0.4
SNX6-209ENST00000557265 SKOR1P84550 965 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 STIM1Q13586 685 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 FGL2Q14314 439 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 DEFB133Q30KQ1 61 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 C5orf22Q49AR2 442 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 ALFQ53S48 1182 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 ISM2Q6H9L7 571 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 KYAT3Q6YP21 454 aaKnown RBP12.57□□□□□ -0.4
SNX6-209ENST00000557265 CCDC81Q6ZN84 652 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 RBM44Q6ZP01 1051 aaKnown RBP12.57□□□□□ -0.4
SNX6-209ENST00000557265 DPY19L3Q6ZPD9 716 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 PARGQ86W56 976 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 TPCN2Q8NHX9 752 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 SPATA20Q8TB22 786 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 LMX1AQ8TE12 382 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 SMARCE1Q969G3 411 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 DHTKD1Q96HY7 919 aaPredicted RBP12.57□□□□□ -0.4
SNX6-209ENST00000557265 PPP1R16AQ96I34 528 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 FEM1CQ96JP0 617 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 ASNSD1Q9NWL6 643 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 PCDHGA8Q9Y5G5 932 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 CSNK1G3Q9Y6M4 447 aa12.57□□□□□ -0.4
SNX6-209ENST00000557265 A0A0D9SEW6 157 aa12.56□□□□□ -0.4
SNX6-209ENST00000557265 EME2A4GXA9 379 aaPredicted RBP12.56□□□□□ -0.4
SNX6-209ENST00000557265 CDRT15L2A8MXV6 281 aa12.56□□□□□ -0.4
SNX6-209ENST00000557265 MUSKO15146 869 aa12.56□□□□□ -0.4
SNX6-209ENST00000557265 AQP9O43315 295 aa12.56□□□□□ -0.4
SNX6-209ENST00000557265 TNFSF15O95150 251 aa12.56□□□□□ -0.4
SNX6-209ENST00000557265 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
SNX6-209ENST00000557265 JUNDP17535 347 aa12.56□□□□□ -0.4
SNX6-209ENST00000557265 RABIFP47224 123 aa12.56□□□□□ -0.4
SNX6-209ENST00000557265 CLCN6P51797 869 aa12.56□□□□□ -0.4
SNX6-209ENST00000557265 NEK3P51956 506 aa12.56□□□□□ -0.4
SNX6-209ENST00000557265 CLN3Q13286 438 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms