RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 ADAM23O75077 832 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 HOXB2P14652 356 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 PECAM1P16284 738 aaPredicted RBP16.75■□□□□ 0.27
PCNX4-213ENST00000556907 AMPD1P23109 780 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 IL12RB1P42701 662 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 OTUD4Q01804 1114 aaKnown RBP16.75■□□□□ 0.27
PCNX4-213ENST00000556907 PAFAH1B3Q15102 231 aaKnown RBP16.75■□□□□ 0.27
PCNX4-213ENST00000556907 CCNG2Q16589 344 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 AFMIDQ63HM1 303 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 C8orf74Q6P047 294 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 CCDC33Q8N5R6 958 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 OR7D4Q8NG98 312 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 ACTL9Q8TC94 416 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 CYB5D2Q8WUJ1 264 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 SORCS1Q8WY21 1168 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 SLCO2A1Q92959 643 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 MRGPRX3Q96LB0 322 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 PCYOX1Q9UHG3 505 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 VPS51Q9UID3 782 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 CBX4O00257 560 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 LIASO43766 372 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 ATP9BO43861 1147 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 MFSD11O43934 449 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 COILP38432 576 aaPredicted RBP16.74■□□□□ 0.27
PCNX4-213ENST00000556907 TERF1P54274 439 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 SERINC3Q13530 473 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 DHX34Q14147 1143 aaKnown RBP16.74■□□□□ 0.27
PCNX4-213ENST00000556907 INO80DQ53TQ3 878 aaPredicted RBP16.74■□□□□ 0.27
PCNX4-213ENST00000556907 TTC27Q6P3X3 843 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 PKN3Q6P5Z2 889 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 KLHL7Q8IXQ5 586 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 SH2D3CQ8N5H7 860 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 SLC35B2Q8TB61 432 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 ATG4AQ8WYN0 398 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 NKD2Q969F2 451 aaPredicted RBP16.74■□□□□ 0.27
PCNX4-213ENST00000556907 MAGOHBQ96A72 148 aaKnown RBP16.74■□□□□ 0.27
PCNX4-213ENST00000556907 HAUS1Q96CS2 278 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 MYO19Q96H55 970 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 ACOX2Q99424 681 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 KRT12Q99456 494 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 CEP44Q9C0F1 390 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 KLC2Q9H0B6 622 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 NOL6Q9H6R4 1146 aaKnown RBP16.74■□□□□ 0.27
PCNX4-213ENST00000556907 ETNK2Q9NVF9 386 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 CACNA2D2Q9NY47 1150 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 RAD54BQ9Y620 910 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 CACNA1IQ9P0X4 2223 aa16.74■□□□□ 0.27
PCNX4-213ENST00000556907 EDDM13A0A1B0GTR0 161 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 MCF2LO15068 1137 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 ZMPSTE24O75844 475 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 APBB3O95704 486 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 EPHX1P07099 455 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 C7P10643 843 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 MX2P20592 715 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 ACVRL1P37023 503 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 NR2C2P49116 596 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 SATB1Q01826 763 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 CAMK2GQ13555 558 aaPredicted RBP16.73■□□□□ 0.27
PCNX4-213ENST00000556907 OASLQ15646 514 aaKnown RBP16.73■□□□□ 0.27
PCNX4-213ENST00000556907 HNRNPA1L2Q32P51 320 aaKnown RBP16.73■□□□□ 0.27
PCNX4-213ENST00000556907 GLE1Q53GS7 698 aaKnown RBP16.73■□□□□ 0.27
PCNX4-213ENST00000556907 TMCO4Q5TGY1 634 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 CCDC137Q6PK04 289 aaKnown RBP16.73■□□□□ 0.27
PCNX4-213ENST00000556907 BZW1Q7L1Q6 419 aaKnown RBP16.73■□□□□ 0.27
PCNX4-213ENST00000556907 ZNF354CQ86Y25 554 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 TSTD1Q8NFU3 115 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 GRK7Q8WTQ7 553 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 C1orf54Q8WWF1 131 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 P3H4Q92791 437 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 CCDC114Q96M63 670 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 OLFM3Q96PB7 478 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 EBF1Q9UH73 591 aa16.73■□□□□ 0.27
PCNX4-213ENST00000556907 A0A1W2PQF6 199 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 K7ESF4 209 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 CTSOP43234 321 aaPredicted RBP16.72■□□□□ 0.27
PCNX4-213ENST00000556907 SERPINH1P50454 418 aaKnown RBP16.72■□□□□ 0.27
PCNX4-213ENST00000556907 GBE1Q04446 702 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 XRCC4Q13426 336 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 BYSLQ13895 437 aaKnown RBP16.72■□□□□ 0.27
PCNX4-213ENST00000556907 RFTN1Q14699 578 aaPredicted RBP16.72■□□□□ 0.27
PCNX4-213ENST00000556907 ANGPT1Q15389 498 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 CCDC70Q6NSX1 233 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 NPNTQ6UXI9 565 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 TMEM92Q6UXU6 159 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 ARHGAP12Q8IWW6 846 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 PLPP6Q8IY26 295 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 ATP11CQ8NB49 1132 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 UBXN4Q92575 508 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 RUBCNQ92622 972 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 ISG20Q96AZ6 181 aaKnown RBP16.72■□□□□ 0.27
PCNX4-213ENST00000556907 HMCESQ96FZ2 354 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 RPL10LQ96L21 214 aaKnown RBP16.72■□□□□ 0.27
PCNX4-213ENST00000556907 SLC39A8Q9C0K1 460 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 SLCO3A1Q9UIG8 710 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 DNPEPQ9ULA0 475 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 MFHAS1Q9Y4C4 1052 aa16.72■□□□□ 0.27
PCNX4-213ENST00000556907 FARP1Q9Y4F1 1045 aaPredicted RBP16.72■□□□□ 0.27
PCNX4-213ENST00000556907 CKAP5Q14008 2032 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 ANTXRLA6NF34 631 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 FAM187AA6NFU0 413 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms