RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 PIAS2O75928 621 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 FGFR1OPO95684 399 aaKnown RBP15.11■□□□□ 0.01
CHD8-211ENST00000556833 CDK4P11802 303 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 HNRNPA2B1P22626 353 aaKnown RBP15.11■□□□□ 0.01
CHD8-211ENST00000556833 CLCN1P35523 988 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 OVGP1Q12889 678 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 ZNF211Q13398 564 aaPredicted RBP15.11■□□□□ 0.01
CHD8-211ENST00000556833 RAPGEF1Q13905 1077 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 BECN1Q14457 450 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 FAM102AQ5T9C2 384 aaPredicted RBP15.11■□□□□ 0.01
CHD8-211ENST00000556833 CRTC1Q6UUV9 634 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 DPY19L3Q6ZPD9 716 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 ERN2Q76MJ5 926 aaKnown RBP15.11■□□□□ 0.01
CHD8-211ENST00000556833 SLC26A9Q7LBE3 791 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 ELOA2Q8IYF1 753 aaPredicted RBP15.11■□□□□ 0.01
CHD8-211ENST00000556833 OR6K2Q8NGY2 324 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 OR4C6Q8NH72 309 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 FGF11Q92914 225 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 CCDC114Q96M63 670 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 NPY6RQ99463 290 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 LGMNQ99538 433 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.11■□□□□ 0.01
CHD8-211ENST00000556833 ARHGEF38Q9NXL2 777 aa15.11■□□□□ 0.01
CHD8-211ENST00000556833 FCF1Q9Y324 198 aaKnown RBP15.11■□□□□ 0.01
CHD8-211ENST00000556833 CFAP46Q8IYW2 2715 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 RAD51BO15315 384 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 OR1E1P30953 314 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 GKP32189 559 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 NUDT1P36639 197 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 RECQLP46063 649 aaPredicted RBP15.1■□□□□ 0.01
CHD8-211ENST00000556833 ILKQ13418 452 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 FGL2Q14314 439 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 TBC1D25Q3MII6 688 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 RAB6CQ53S08 254 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 FOXR2Q6PJQ5 311 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 LEKR1Q6ZMV7 388 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 Q6ZSR6 202 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 PHLDB2Q86SQ0 1253 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 ERICH1Q86X53 443 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 IRF2BP1Q8IU81 584 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 SPACA3Q8IXA5 215 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 DRC7Q8IY82 874 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 ZNF683Q8IZ20 524 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 DCBLD1Q8N8Z6 715 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 SNIP1Q8TAD8 396 aaKnown RBP15.1■□□□□ 0.01
CHD8-211ENST00000556833 APOLD1Q96LR9 279 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 TM6SF2Q9BZW4 377 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 RAB6CQ9H0N0 254 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 ZDHHC6Q9H6R6 413 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 KLHL11Q9NVR0 708 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 RWDD2AQ9UIY3 292 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 ITM2BQ9Y287 266 aa15.1■□□□□ 0.01
CHD8-211ENST00000556833 POM121BA6NF01 834 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 PES1O00541 588 aaKnown RBP15.09■□□□□ 0.01
CHD8-211ENST00000556833 CASC3O15234 703 aaKnown RBP15.09■□□□□ 0.01
CHD8-211ENST00000556833 OPA1O60313 960 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 USP12O75317 370 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 CSO75390 466 aaKnown RBP15.09■□□□□ 0.01
CHD8-211ENST00000556833 PAK4O96013 591 aaPredicted RBP15.09■□□□□ 0.01
CHD8-211ENST00000556833 PRNPP04156 253 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 GIMD1P0DJR0 217 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 ACTN2P35609 894 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 FLT3P36888 993 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 CXCR3P49682 368 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 VASPP50552 380 aaPredicted RBP15.09■□□□□ 0.01
CHD8-211ENST00000556833 GABREP78334 506 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 TLE3Q04726 772 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 C19orf57Q0VDD7 668 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 DRAP1Q14919 205 aaPredicted RBP15.09■□□□□ 0.01
CHD8-211ENST00000556833 TCEA2Q15560 299 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 CDKN3Q16667 212 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 TPD52L1Q16890 204 aaPredicted RBP15.09■□□□□ 0.01
CHD8-211ENST00000556833 LRRC73Q5JTD7 316 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 BRMS1LQ5PSV4 323 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 TRNP1Q6NT89 227 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 LRRC31Q6UY01 552 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 FAM131BQ86XD5 332 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 RYBPQ8N488 228 aaPredicted RBP15.09■□□□□ 0.01
CHD8-211ENST00000556833 DCAF4L2Q8NA75 395 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 CFAP57Q96MR6 1250 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 ATP13A1Q9HD20 1204 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 GGT7Q9UJ14 662 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 STAP1Q9ULZ2 295 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 WASF2Q9Y6W5 498 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 RP1P56715 2156 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 ATMQ13315 3056 aa15.09■□□□□ 0.01
CHD8-211ENST00000556833 COL27A1Q8IZC6 1860 aaPredicted RBP15.08■□□□□ 0.01
CHD8-211ENST00000556833 LY6G6EA0A0G2JKS1 128 aa15.08■□□□□ 0
CHD8-211ENST00000556833 CPED1A4D0V7 1026 aa15.08■□□□□ 0
CHD8-211ENST00000556833 A6NNZ2 444 aa15.08■□□□□ 0
CHD8-211ENST00000556833 ATXN7O15265 892 aaPredicted RBP15.08■□□□□ 0
CHD8-211ENST00000556833 ADRB3P13945 408 aa15.08■□□□□ 0
CHD8-211ENST00000556833 NEK3P51956 506 aa15.08■□□□□ 0
CHD8-211ENST00000556833 E2F1Q01094 437 aa15.08■□□□□ 0
CHD8-211ENST00000556833 DEFB133Q30KQ1 61 aa15.08■□□□□ 0
CHD8-211ENST00000556833 C5orf22Q49AR2 442 aa15.08■□□□□ 0
CHD8-211ENST00000556833 TPRG1LQ5T0D9 272 aa15.08■□□□□ 0
CHD8-211ENST00000556833 FOXR1Q6PIV2 292 aa15.08■□□□□ 0
CHD8-211ENST00000556833 PARS2Q7L3T8 475 aaKnown RBP15.08■□□□□ 0
CHD8-211ENST00000556833 XYLT1Q86Y38 959 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms