RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 MAPRE1Q15691 268 aaKnown RBP15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 C1orf220Q5T0J3 134 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 PGAM4Q8N0Y7 254 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 FIG4Q92562 907 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 SKA1Q96BD8 255 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 MAGED4Q96JG8 741 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 STK39Q9UEW8 545 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 PCDHB12Q9Y5F1 795 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 DLGAP3O95886 979 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 DLDP09622 509 aaKnown RBP15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 ATP6V0D2Q8N8Y2 350 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 FAXDC2Q96IV6 333 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 NOL11Q9H8H0 719 aaKnown RBP15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 TIMMDC1Q9NPL8 285 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 CRYL1Q9Y2S2 319 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 C10orf71Q711Q0 1435 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 C2orf81A6NN90 581 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 MDM4O15151 490 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 ITM2AO43736 263 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 ASPAP45381 313 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 EIF2B2P49770 351 aaKnown RBP15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 SLC7A2P52569 658 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 JAG1P78504 1218 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 DPYSQ14117 519 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 ARL13AQ5H913 290 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 C10orf120Q5SQS8 335 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 CACHD1Q5VU97 1274 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 PMF1Q6P1K2 205 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 MIB1Q86YT6 1006 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 UBR7Q8N806 425 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 FNDC5Q8NAU1 212 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 CMASQ8NFW8 434 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 DENND1AQ8TEH3 1009 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 CIB1Q99828 191 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 KATNAL1Q9BW62 490 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 FAM8A1Q9UBU6 413 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 DSEQ9UL01 958 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 KPNA4O00629 521 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 DEFA1P59665 94 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 DEFA3P59666 94 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 NR6A1Q15406 480 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 ANKRD13AQ8IZ07 590 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 PTCD3Q96EY7 689 aaKnown RBP15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 FAM210AQ96ND0 272 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 NIFKQ9BYG3 293 aaKnown RBP15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 PTTG2Q9NZH5 202 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 PCDHGB4Q9UN71 923 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 MAFBQ9Y5Q3 323 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 METTL18O95568 372 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 LGALS2P05162 132 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 NPR3P17342 541 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 TUBP50607 506 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 RAD23AP54725 363 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 IL5RAQ01344 420 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 BFSP2Q13515 415 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 ANKS6Q68DC2 871 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 TFAP2DQ7Z6R9 452 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 MPP5Q8N3R9 675 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 RHOJQ9H4E5 214 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 RAD54BQ9Y620 910 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 TEX264Q9Y6I9 313 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 ZNF536O15090 1300 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 ZNF541Q9H0D2 1346 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 TIPRLO75663 272 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 HIST1H2AGP0C0S8 130 aaPredicted RBP15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 TFEBP19484 476 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 HIST1H2ADP20671 130 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 CCNFP41002 786 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 NOVP48745 357 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 USP46P62068 366 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 RALGDSQ12967 914 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 LSM12Q3MHD2 195 aaKnown RBP15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 GPR107Q5VW38 600 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 ABRAXAS1Q6UWZ7 409 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 PLPPR4Q7Z2D5 763 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 HERC6Q8IVU3 1022 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 ACTRT2Q8TDY3 377 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 HIST1H2AHQ96KK5 128 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 HIST1H2AJQ99878 128 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 H2AFJQ9BTM1 129 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 CINPQ9BW66 212 aaPredicted RBP15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 WWOXQ9NZC7 414 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 LBPP18428 481 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 RENBPP51606 427 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 LIMK2P53671 638 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 ITGADQ13349 1161 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 KCNJ11Q14654 390 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 ZNF410Q86VK4 478 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 LZTR1Q8N653 840 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 ASB2Q96Q27 587 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 HERPUD2Q9BSE4 406 aa15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 GATA5Q9BWX5 397 aaPredicted RBP15.21■□□□□ 0.03
ARHGEF40-207ENST00000556399 AKT1P31749 480 aa15.21■□□□□ 0.02
ARHGEF40-207ENST00000556399 LPIN1Q14693 890 aa15.21■□□□□ 0.02
ARHGEF40-207ENST00000556399 DCP1BQ8IZD4 617 aaKnown RBP15.21■□□□□ 0.02
ARHGEF40-207ENST00000556399 PLEKHG4BQ96PX9 1271 aa15.21■□□□□ 0.02
ARHGEF40-207ENST00000556399 GPR63Q9BZJ6 419 aa15.21■□□□□ 0.02
ARHGEF40-207ENST00000556399 SLC17A6Q9P2U8 582 aa15.21■□□□□ 0.02
ARHGEF40-207ENST00000556399 DHRS12A0PJE2 317 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 PTGES3LE9PB15 166 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms