RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 CATSPERBQ9H7T0 1116 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 RXFP3Q9NSD7 469 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 ABHD10Q9NUJ1 306 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 ZNHIT6Q9NWK9 470 aaKnown RBP11.79□□□□□ -0.52
SLIRP-205ENST00000556310 FBXL12Q9NXK8 326 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 SERGEFQ9UGK8 458 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 DNAI1Q9UI46 699 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 NCKAP1Q9Y2A7 1128 aa11.79□□□□□ -0.52
SLIRP-205ENST00000556310 TP53BP1Q12888 1972 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-205ENST00000556310 PLXNA2O75051 1894 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 CNOT1A5YKK6 2376 aaKnown RBP11.78□□□□□ -0.52
SLIRP-205ENST00000556310 A0A1W2PP55 124 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 SSU72P8A0A1W2PR75 194 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 METTL12A8MUP2 240 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 WASH4PA8MWX3 477 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 C1QTNF3-AMACRE9PGA6 284 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 K7ERQ8 282 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 MCF2LO15068 1137 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 SMAD6O43541 496 aaKnown RBP11.78□□□□□ -0.52
SLIRP-205ENST00000556310 RNASEH2AO75792 299 aaKnown RBP11.78□□□□□ -0.52
SLIRP-205ENST00000556310 CFIP05156 583 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 CYP1A2P05177 515 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 MIPP30301 263 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 PCK1P35558 622 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 ACVRL1P37023 503 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 GEMIN4P57678 1058 aaKnown RBP11.78□□□□□ -0.52
SLIRP-205ENST00000556310 TPI1P60174 286 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 ARF5P84085 180 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 SLC18A3Q16572 532 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 ERMARDQ5T6L9 678 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 DCAF12L1Q5VU92 463 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 FAM46CQ5VWP2 391 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 CYP4V2Q6ZWL3 525 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-205ENST00000556310 CNGA4Q8IV77 575 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 RGL4Q8IZJ4 473 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 AADATQ8N5Z0 425 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 PCDH20Q8N6Y1 951 aaKnown RBP11.78□□□□□ -0.52
SLIRP-205ENST00000556310 NIPA2Q8N8Q9 360 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 OR2A12Q8NGT7 310 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 GANCQ8TET4 914 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 ARHGEF2Q92974 986 aaKnown RBP11.78□□□□□ -0.52
SLIRP-205ENST00000556310 OMDQ99983 421 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 NUP85Q9BW27 656 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 DHX35Q9H5Z1 703 aaKnown RBP11.78□□□□□ -0.52
SLIRP-205ENST00000556310 C6orf106Q9H6K1 298 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-205ENST00000556310 CAPN10Q9HC96 672 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 GPATCH2LQ9NWQ4 482 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 DONSONQ9NYP3 566 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 PCSK1NQ9UHG2 260 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 ANAPC7Q9UJX3 599 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 SLC6A14Q9UN76 642 aa11.78□□□□□ -0.52
SLIRP-205ENST00000556310 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-205ENST00000556310 ZSCAN5CA6NGD5 496 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-205ENST00000556310 BNIP3LO60238 219 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 SERPINF2P08697 491 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 GNSP15586 552 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 GOT1P17174 413 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 DRD3P35462 400 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 RECQLP46063 649 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-205ENST00000556310 ZNF135P52742 658 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-205ENST00000556310 GALCP54803 685 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 YBEYP58557 167 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-205ENST00000556310 IRX4P78413 519 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 GFPT1Q06210 699 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-205ENST00000556310 TBX2Q13207 712 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-205ENST00000556310 PIGHQ14442 188 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-205ENST00000556310 POLD3Q15054 466 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-205ENST00000556310 CA9Q16790 459 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 ASTE1Q2TB18 679 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-205ENST00000556310 PARP15Q460N3 678 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 STPG1Q5TH74 334 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 UMODL1-AS1Q8N2C9 162 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 HDDC3Q8N4P3 179 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 ZCCHC9Q8N567 271 aaKnown RBP11.77□□□□□ -0.53
SLIRP-205ENST00000556310 PIP4K2CQ8TBX8 421 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 FAM131CQ96AQ9 280 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 ARHGEF26Q96DR7 871 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 KCTD15Q96SI1 283 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-205ENST00000556310 TRIM5Q9C035 493 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 DEF6Q9H4E7 631 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 NOL6Q9H6R4 1146 aaKnown RBP11.77□□□□□ -0.53
SLIRP-205ENST00000556310 TMEM9BQ9NQ34 198 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 IP6K2Q9UHH9 426 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 SARDHQ9UL12 918 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 PPM1HQ9ULR3 514 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 HPCAL4Q9UM19 191 aa11.77□□□□□ -0.53
SLIRP-205ENST00000556310 SPTBN2O15020 2390 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 A0A1B0GTW7 788 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 LRRC72A6NJI9 287 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 C10orf142B7Z368 130 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 EEF2KO00418 725 aaKnown RBP11.76□□□□□ -0.53
SLIRP-205ENST00000556310 SLC7A4O43246 635 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 AKR1B10O60218 316 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 ZNF821O75541 412 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-205ENST00000556310 CD160O95971 181 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 PRNPP04156 253 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 CTSLP07711 333 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 ENGP17813 658 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 MAOBP27338 520 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 CHRNA3P32297 505 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms