RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 CTSLP07711 333 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 ERCC2P18074 760 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 ZNF135P52742 658 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-217ENST00000556203 SERINC3Q13530 473 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 DPYSQ14117 519 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 HADHQ16836 314 aaKnown RBP15.49■□□□□ 0.07
ACTN1-217ENST00000556203 RSPO4Q2I0M5 234 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-217ENST00000556203 DPY19L3Q6ZPD9 716 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 CPNE8Q86YQ8 564 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 CHST14Q8NCH0 376 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 TEKT4Q8WW24 435 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 SNX19Q92543 992 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 RMDN1Q96DB5 314 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 TM6SF2Q9BZW4 377 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 KLC2Q9H0B6 622 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 MIR1-1HGQ9H1L0 117 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 PCED1AQ9H1Q7 454 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 LRRC19Q9H756 370 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 EVLQ9UI08 416 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-217ENST00000556203 FZD4Q9ULV1 537 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 SPAG17Q6Q759 2223 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 THADAQ6YHU6 1953 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 ZSCAN5CA6NGD5 496 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-217ENST00000556203 TMEM110-MUSTN1A8MSY1 372 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 FSBPO95073 299 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 CFIP05156 583 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 DRD3P35462 400 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 GJC1P36383 396 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 ARL4AP40617 200 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 HCAR3P49019 387 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 NDST2P52849 883 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 IRX4P78413 519 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 DUOXA1Q1HG43 343 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 CARD16Q5EG05 197 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 NCEH1Q6PIU2 408 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-217ENST00000556203 NPWQ8N729 165 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 OR14C36Q8NHC7 312 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 CEP76Q8TAP6 659 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 SLC35G2Q8TBE7 412 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 GRIN3AQ8TCU5 1115 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 NETO1Q8TDF5 533 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 DNASE2BQ8WZ79 361 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 ANP32EQ9BTT0 268 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 NUSAP1Q9BXS6 441 aaKnown RBP15.48■□□□□ 0.07
ACTN1-217ENST00000556203 SLC39A8Q9C0K1 460 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 IL36AQ9UHA7 158 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 LCMT1Q9UIC8 334 aa15.48■□□□□ 0.07
ACTN1-217ENST00000556203 CDV3Q9UKY7 258 aaKnown RBP15.48■□□□□ 0.07
ACTN1-217ENST00000556203 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-217ENST00000556203 DOCK4Q8N1I0 1966 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 LNP1A1A4G5 178 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 ARHGAP42A6NI28 874 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 LRRC72A6NJI9 287 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 RNF103O00237 685 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 KPNA3O00505 521 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-217ENST00000556203 TMCC1O94876 653 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 PRNPP04156 253 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 GNSP15586 552 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 ID4P47928 161 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 CCNHP51946 323 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-217ENST00000556203 ADPRHP54922 357 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 CNTN1Q12860 1018 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 KRT81Q14533 505 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 MESDQ14696 234 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 ARSIQ5FYB1 569 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 KIAA0895LQ68EN5 471 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 SLC23A3Q6PIS1 610 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 POLNQ7Z5Q5 900 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 RABEPKQ7Z6M1 372 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 RHOT2Q8IXI1 618 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 RYBPQ8N488 228 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-217ENST00000556203 NETO2Q8NC67 525 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 TMIEQ8NEW7 156 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 OR6K2Q8NGY2 324 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 ISG20Q96AZ6 181 aaKnown RBP15.47■□□□□ 0.07
ACTN1-217ENST00000556203 BIRC7Q96CA5 298 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 CSPG4P5Q96PW8 444 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 PANX2Q96RD6 677 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 EDEM2Q9BV94 578 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 PCDH18Q9HCL0 1135 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 FSCN3Q9NQT6 498 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 HECAQ9UBI9 543 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-217ENST00000556203 SUSD2Q9UGT4 822 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 EIF2B4Q9UI10 523 aaKnown RBP15.47■□□□□ 0.07
ACTN1-217ENST00000556203 INTUQ9ULD6 942 aa15.47■□□□□ 0.07
ACTN1-217ENST00000556203 DFFAO00273 331 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 SLC7A4O43246 635 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 LEFTY1O75610 366 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 SERPINF2P08697 491 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 AMPD1P23109 780 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 MAN1A1P33908 653 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 PAPOLAP51003 745 aaKnown RBP15.46■□□□□ 0.07
ACTN1-217ENST00000556203 CDH6P55285 790 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 TAS2R40P59535 323 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 SNRPD1P62314 119 aaKnown RBP15.46■□□□□ 0.07
ACTN1-217ENST00000556203 AGBL4Q5VU57 503 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 AFMIDQ63HM1 303 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 ARHGAP12Q8IWW6 846 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 PLPP6Q8IY26 295 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms