RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 FATE1Q969F0 183 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 ISG20Q96AZ6 181 aaKnown RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 RPL10LQ96L21 214 aaKnown RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 MRGPRX3Q96LB0 322 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 C16orf45Q96MC5 204 aaPredicted RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 GDAP1L1Q96MZ0 367 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 WDR24Q96S15 920 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 OSBPL9Q96SU4 736 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 GABRG3Q99928 467 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 CINPQ9BW66 212 aaPredicted RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 TMEM245Q9H330 911 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 SPATA6Q9NWH7 488 aaPredicted RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 RNF14Q9UBS8 474 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 AMACRQ9UHK6 382 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 SLCO3A1Q9UIG8 710 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 MFHAS1Q9Y4C4 1052 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 SAR1BQ9Y6B6 198 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 GOLGA6L10A0A0M3HER8 536 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 CFAP69A5D8W1 941 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 TTC34A8MYJ7 566 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 J3KR12 359 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 SGK1O00141 431 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 PGRMC1O00264 195 aaKnown RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 MATN3O15232 486 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 ALOX15BO15296 676 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 LAMTOR5O43504 91 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 MAFKO60675 156 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 TMCC1O94876 653 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 MAP3K6O95382 1288 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 APBB3O95704 486 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 IGSF6O95976 241 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 GSRP00390 522 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 MT-CO1P00395 513 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 FGGP02679 453 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 RBP3P10745 1247 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 CCNB1P14635 433 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 CES1P23141 567 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 GLDCP23378 1020 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 PRKCHP24723 683 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 AVPR2P30518 371 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 MMP13P45452 471 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 NUMBP49757 651 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 STK19P49842 368 aaPredicted RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 OTUD4Q01804 1114 aaKnown RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 PPIDQ08752 370 aaKnown RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 CCDC15Q0P6D6 951 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 SLC10A2Q12908 348 aaPredicted RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 MTAPQ13126 283 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 CAMK2GQ13555 558 aaPredicted RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 ELAVL3Q14576 367 aaKnown RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 LBRQ14739 615 aaKnown RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 GRM3Q14832 879 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 CRY1Q16526 586 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 SLC45A4Q5BKX6 768 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 CARD16Q5EG05 197 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 RALGPS1Q5JS13 557 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 FAM46CQ5VWP2 391 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 HEATR6Q6AI08 1181 aaKnown RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 AADACL2Q6P093 401 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 C22orf39Q6P5X5 142 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 DARS2Q6PI48 645 aaKnown RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 NPNTQ6UXI9 565 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 SYT10Q6XYQ8 523 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 Q6ZS52 159 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 NYAP1Q6ZVC0 841 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 ZC3H18Q86VM9 953 aaKnown RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 RASGEF1CQ8N431 466 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 RYBPQ8N488 228 aaPredicted RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 CAMKK1Q8N5S9 505 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 DTWD2Q8NBA8 298 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 TSTD1Q8NFU3 115 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 ACTRT1Q8TDG2 376 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 LRIG1Q96JA1 1093 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 OLFM3Q96PB7 478 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 PSKH2Q96QS6 385 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 ACOX2Q99424 681 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 VAT1Q99536 393 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 PDFQ9HBH1 243 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 RBM22Q9NW64 420 aaKnown RBP eCLIP7.77□□□□□ -1.17
TDP1-214ENST00000556063 TTC7AQ9ULT0 858 aaPredicted RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 FCF1Q9Y324 198 aaKnown RBP7.77□□□□□ -1.17
TDP1-214ENST00000556063 CKAP5Q14008 2032 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 COL6A3P12111 3177 aa7.77□□□□□ -1.17
TDP1-214ENST00000556063 C5orf42Q9H799 3197 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 C1QTNF3-AMACRE9PGA6 284 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 K7ERQ8 282 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 DLL1O00548 723 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 SMAD6O43541 496 aaKnown RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 PI15O43692 258 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 BNIP3LO60238 219 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 ADAM23O75077 832 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 SIN3BO75182 1162 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 PAPSS2O95340 614 aaPredicted RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 POP4O95707 220 aaKnown RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 PRNPP04156 253 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 HLA-EP13747 358 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 PECAM1P16284 738 aaPredicted RBP7.76□□□□□ -1.17
TDP1-214ENST00000556063 CA4P22748 312 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 HOXA6P31267 233 aa7.76□□□□□ -1.17
TDP1-214ENST00000556063 STIP1P31948 543 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms