RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	NET1	Q7Z628	596 aa	Predicted RBP	12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	PYDC1	Q8WXC3	89 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	FAM162A	Q96A26	154 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	C17orf80	Q9BSJ5	609 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	TRIM17	Q9Y577	477 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	NR2E3	Q9Y5X4	410 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	LTBP3	Q9NS15	1303 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	C1orf232	A0A0U1RR37	186 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	BIRC5	O15392	142 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	DCX	O43602	365 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	MAGEC1	O60732	1142 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	JCHAIN	P01591	159 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	USP17L7	P0C7H9	530 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	PSMC3	P17980	439 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	EDNRB	P24530	442 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	CNTF	P26441	200 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	OVOS1	Q6IE37	1185 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	TRNP1	Q6NT89	227 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	KYAT3	Q6YP21	454 aa	Known RBP	12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	COLGALT1	Q8NBJ5	622 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	HTR3C	Q8WXA8	447 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	CAPN10	Q9HC96	672 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	CNTN3	Q9P232	1028 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	ERI2	A8K979	691 aa	Known RBP	12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	TPP1	O14773	563 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	TBC1D4	O60343	1298 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	ZMPSTE24	O75844	475 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	IQCF3	P0C7M6	154 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	SERPINB10	P48595	397 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	PCSK9	Q8NBP7	692 aa	Known RBP	12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	DDHD1	Q8NEL9	900 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	PIWIL2	Q8TC59	973 aa	Known RBP	12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	GCNA	Q96QF7	691 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	EBF4	Q9BQW3	602 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	SIKE1	Q9BRV8	207 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	CACNA2D2	Q9NY47	1150 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	SOX13	Q9UN79	622 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	SLC8A2	Q9UPR5	921 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	RUVBL2	Q9Y230	463 aa	Known RBP	12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	C16orf96	A6NNT2	1141 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	ZBTB42	B2RXF5	422 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	PTGES3L	E9PB15	166 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	BAIAP3	O94812	1187 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	SERPINA6	P08185	405 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	ANPEP	P15144	967 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	MGAT1	P26572	445 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	SLC16A1	P53985	500 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	ATXN1	P54253	815 aa	Known RBP	12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	PKNOX1	P55347	436 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	SLC25A3	Q00325	362 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	WASHC5	Q12768	1159 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	UGP2	Q16851	508 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	AGK	Q53H12	422 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	ARC	Q7LC44	396 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	UNC5B	Q8IZJ1	945 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	ULBP1	Q9BZM6	244 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	PCDHB7	Q9Y5E2	793 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029		A6NHS1	94 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	TM7SF2	O76062	418 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	RALB	P11234	206 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	CYP3A5	P20815	502 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	ATP6V1B2	P21281	511 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	FDFT1	P37268	417 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	NR2C2	P49116	596 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	RUNX1T1	Q06455	604 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	ZRANB3	Q5FWF4	1079 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	SDHAF4	Q5VUM1	108 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	SLC9A4	Q6AI14	798 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	LRRC8B	Q6P9F7	803 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	USP6NL	Q92738	828 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	MTERF3	Q96E29	417 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	SIRPG	Q9P1W8	387 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	SLC17A6	Q9P2U8	582 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	DCDC2	Q9UHG0	476 aa		12.46	□□□□□ -0.41
TMPO-212	ENST00000556029	MDM4	O15151	490 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	PAPSS1	O43252	624 aa	Predicted RBP	12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	MYO1D	O94832	1006 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	PGM3	O95394	542 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	OCM2	P0CE71	109 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	OCM	P0CE72	109 aa	Predicted RBP	12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	EPB42	P16452	691 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	TPSB2	P20231	275 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	HIST1H2AD	P20671	130 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	RFX3	P48380	749 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	KCNK10	P57789	538 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	ARHGAP1	Q07960	439 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	SNX17	Q15036	470 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	ANGPT1	Q15389	498 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	TPSAB1	Q15661	275 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	NEDD8	Q15843	81 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	PTRHD1	Q6GMV3	140 aa	Known RBP	12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	PIGZ	Q86VD9	579 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	FBXO27	Q8NI29	283 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	NPLOC4	Q8TAT6	608 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	HIST1H2AH	Q96KK5	128 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	SIGLEC10	Q96LC7	697 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	LGMN	Q99538	433 aa		12.46	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms