RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CKMT1AP12532 417 aa14.69□□□□□ -0.06
CHMP4BP1-201ENST00000556017 TPRG1LQ5T0D9 272 aa14.69□□□□□ -0.06
CHMP4BP1-201ENST00000556017 KDM7AQ6ZMT4 941 aa14.69□□□□□ -0.06
CHMP4BP1-201ENST00000556017 DPY19L3Q6ZPD9 716 aa14.69□□□□□ -0.06
CHMP4BP1-201ENST00000556017 SPACA3Q8IXA5 215 aa14.69□□□□□ -0.06
CHMP4BP1-201ENST00000556017 OR7D4Q8NG98 312 aa14.69□□□□□ -0.06
CHMP4BP1-201ENST00000556017 RNF34Q969K3 372 aa14.69□□□□□ -0.06
CHMP4BP1-201ENST00000556017 PGAP3Q96FM1 320 aaPredicted RBP14.69□□□□□ -0.06
CHMP4BP1-201ENST00000556017 TKTL2Q9H0I9 626 aa14.69□□□□□ -0.06
CHMP4BP1-201ENST00000556017 MUC3BQ9H195 1237 aa14.69□□□□□ -0.06
CHMP4BP1-201ENST00000556017 TNKS2Q9H2K2 1166 aa14.69□□□□□ -0.06
CHMP4BP1-201ENST00000556017 MPP6Q9NZW5 540 aa14.69□□□□□ -0.06
CHMP4BP1-201ENST00000556017 KLF15Q9UIH9 416 aa14.69□□□□□ -0.06
CHMP4BP1-201ENST00000556017 LRRK1Q38SD2 2015 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 GTPBP10A4D1E9 387 aaKnown RBP14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 POM121BA6NF01 834 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 KPNA3O00505 521 aaPredicted RBP14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 CASC3O15234 703 aaKnown RBP14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 FFAR2O15552 330 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 LZTS3O60299 673 aaPredicted RBP14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 ZNF18P17022 549 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 CDH5P33151 784 aaPredicted RBP14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 USP8P40818 1118 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 E2F1Q01094 437 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 FZD2Q14332 565 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 ARSIQ5FYB1 569 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 BRMS1LQ5PSV4 323 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 C22orf39Q6P5X5 142 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 GBP6Q6ZN66 633 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 TMC6Q7Z403 805 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 SETD3Q86TU7 594 aaPredicted RBP14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 FAM71AQ8IYT1 594 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 ZNF843Q8N446 348 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 DCAF4L2Q8NA75 395 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 ATP11CQ8NB49 1132 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 APOLD1Q96LR9 279 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 TBCBQ99426 244 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 KLF6Q99612 283 aaPredicted RBP14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 HDAC8Q9BY41 377 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 SSUH2Q9Y2M2 353 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 ACTL7AQ9Y615 435 aa14.68□□□□□ -0.06
CHMP4BP1-201ENST00000556017 PIEZO2Q9H5I5 2752 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 SPINT1O43278 529 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 LEFTY1O75610 366 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 NEBLO76041 1014 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 RHOCP08134 193 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 HNRNPA2B1P22626 353 aaKnown RBP14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 FLT3P36888 993 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 GABRB2P47870 512 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 ARF5P84085 180 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 CCDC173Q0VFZ6 552 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 EXOC3L4Q17RC7 722 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 RAB6CQ53S08 254 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 ZNF542PQ5EBM4 170 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 LRRC69Q6ZNQ3 347 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 ERN2Q76MJ5 926 aaKnown RBP14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 TFAP2DQ7Z6R9 452 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 LSM14AQ8ND56 463 aaKnown RBP14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 GRIN3AQ8TCU5 1115 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 C1orf74Q96LT6 269 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 PPP1R9BQ96SB3 815 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 C2orf49Q9BVC5 232 aaPredicted RBP14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 CALN1Q9BXU9 219 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 RAB6CQ9H0N0 254 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 ASCL3Q9NQ33 180 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 RWDD2AQ9UIY3 292 aa14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 PNMA8BQ9ULN7 279 aaPredicted RBP14.67□□□□□ -0.06
CHMP4BP1-201ENST00000556017 FAM170AA1A519 330 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 K7ESM1 405 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 SCAMP1O15126 338 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 RRP8O43159 456 aaKnown RBP14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 DXOO77932 396 aaKnown RBP14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 MPOP05164 745 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 CLCN6P51797 869 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 KRT83P78385 493 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 MTA1Q13330 715 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 C2CD6Q53TS8 623 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 SMYD5Q6GMV2 418 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 Q6ZSR6 202 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 XYLT1Q86Y38 959 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 FAM181AQ8N9Y4 354 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 BAP1Q92560 729 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 IFT43Q96FT9 208 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 FAM81BQ96LP2 452 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 WDCPQ9H6R7 721 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 NDFIP2Q9NV92 336 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 NLGN3Q9NZ94 848 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 IL36AQ9UHA7 158 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 TMEM59LQ9UK28 342 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 DNAJC12Q9UKB3 198 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 NEU3Q9UQ49 428 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 FADS3Q9Y5Q0 445 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 HS3ST3A1Q9Y663 406 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 LRP4O75096 1905 aa14.66□□□□□ -0.06
CHMP4BP1-201ENST00000556017 BSNQ9UPA5 3926 aa14.65□□□□□ -0.06
CHMP4BP1-201ENST00000556017 ILVBLA1L0T0 632 aa14.65□□□□□ -0.06
CHMP4BP1-201ENST00000556017 ENDOD1O94919 500 aa14.65□□□□□ -0.06
CHMP4BP1-201ENST00000556017 CSF2P04141 144 aa14.65□□□□□ -0.06
CHMP4BP1-201ENST00000556017 PRNPP04156 253 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms