RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.99□□□□□ -1.13
LINC00641-202ENST00000555688 TAOK1Q7L7X3 1001 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 TRABD2AQ86V40 505 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 MON1AQ86VX9 555 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 VPS52Q8N1B4 723 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 GALNT11Q8NCW6 608 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 SIGLEC10Q96LC7 697 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 XPO6Q96QU8 1125 aaKnown RBP7.99□□□□□ -1.13
LINC00641-202ENST00000555688 HAPLN3Q96S86 360 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 CCT8L2Q96SF2 557 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 TRIM62Q9BVG3 475 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 ACSS3Q9H6R3 686 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 PPANQ9NQ55 473 aaKnown RBP7.99□□□□□ -1.13
LINC00641-202ENST00000555688 SLC24A2Q9UI40 661 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 NUDT5Q9UKK9 219 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 PRDM4Q9UKN5 801 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 CHMP2BQ9UQN3 213 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 PCDHB5Q9Y5E4 795 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 ACTL7BQ9Y614 415 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 RAD54BQ9Y620 910 aa7.99□□□□□ -1.13
LINC00641-202ENST00000555688 MYO16Q9Y6X6 1858 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 MTMR11A4FU01 709 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 GMNCA6NCL1 334 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 POC1B-GALNT4F8VUJ3 575 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 RNF103O00237 685 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 MSI1O43347 362 aaKnown RBP7.98□□□□□ -1.13
LINC00641-202ENST00000555688 GREM1O60565 184 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 DEAF1O75398 565 aaPredicted RBP7.98□□□□□ -1.13
LINC00641-202ENST00000555688 SOAT2O75908 522 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 PARNO95453 639 aaKnown RBP7.98□□□□□ -1.13
LINC00641-202ENST00000555688 ATP5DP30049 168 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 HOXC13P31276 330 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 GEMIN4P57678 1058 aaKnown RBP7.98□□□□□ -1.13
LINC00641-202ENST00000555688 PPIDQ08752 370 aaKnown RBP7.98□□□□□ -1.13
LINC00641-202ENST00000555688 GALNT2Q10471 571 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 AP1B1Q10567 949 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 PPP2R5DQ14738 602 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 EFTUD2Q15029 972 aaKnown RBP eCLIP7.98□□□□□ -1.13
LINC00641-202ENST00000555688 POU4F3Q15319 338 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 PKN2Q16513 984 aaKnown RBP7.98□□□□□ -1.13
LINC00641-202ENST00000555688 BRMS1LQ5PSV4 323 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 ZNF280DQ6N043 979 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 MSANTD2Q6P1R3 559 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 DENND5BQ6ZUT9 1274 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 DEFB128Q7Z7B8 93 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 NLRP14Q86W24 1093 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 PALM2Q8IXS6 379 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 RNF168Q8IYW5 571 aaPredicted RBP7.98□□□□□ -1.13
LINC00641-202ENST00000555688 ZNF567Q8N184 647 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 COLGALT1Q8NBJ5 622 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 MZB1Q8WU39 189 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 SLC39A13Q96H72 371 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 ZNF317Q96PQ6 595 aaPredicted RBP7.98□□□□□ -1.13
LINC00641-202ENST00000555688 SELENOSQ9BQE4 189 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 GORASP1Q9BQQ3 440 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 CCDC134Q9H6E4 229 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 CWH43Q9H720 699 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 PPCSQ9HAB8 311 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 TBX21Q9UL17 535 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 COL4A6Q14031 1691 aa7.98□□□□□ -1.13
LINC00641-202ENST00000555688 TCRBV9S1A1TA0A576 114 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 TMEM120BA0PK00 339 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 PPP1R12AO14974 1030 aaPredicted RBP7.97□□□□□ -1.13
LINC00641-202ENST00000555688 NCAM2O15394 837 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 OPHN1O60890 802 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 FAM107AO95990 144 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 HAPLN1P10915 354 aaPredicted RBP7.97□□□□□ -1.13
LINC00641-202ENST00000555688 BRAFP15056 766 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 PTPN3P26045 913 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 EPHB2P29323 1055 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 CCR1P32246 355 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 PHBP35232 272 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 FDFT1P37268 417 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 SNRPNP63162 240 aaKnown RBP7.97□□□□□ -1.13
LINC00641-202ENST00000555688 ELAVL2Q12926 359 aaKnown RBP7.97□□□□□ -1.13
LINC00641-202ENST00000555688 TMED2Q15363 201 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 PARP6Q2NL67 630 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 SNAP47Q5SQN1 464 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 ARHGEF18Q6ZSZ5 1173 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 PDZD4Q76G19 769 aaPredicted RBP7.97□□□□□ -1.13
LINC00641-202ENST00000555688 PRPF39Q86UA1 669 aaKnown RBP7.97□□□□□ -1.13
LINC00641-202ENST00000555688 MPP5Q8N3R9 675 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 CCNYQ8ND76 341 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 GRIN3AQ8TCU5 1115 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 DIS3LQ8TF46 1054 aaKnown RBP7.97□□□□□ -1.13
LINC00641-202ENST00000555688 DCAKDQ8WVC6 231 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 HDAC11Q96DB2 347 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 LRRC39Q96DD0 335 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 SPATA17Q96L03 361 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 FCRL2Q96LA5 508 aaPredicted RBP7.97□□□□□ -1.13
LINC00641-202ENST00000555688 CORO1BQ9BR76 489 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 TTPALQ9BTX7 342 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 VN1R3Q9BXE9 311 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 MRPL9Q9BYD2 267 aaKnown RBP7.97□□□□□ -1.13
LINC00641-202ENST00000555688 CEP41Q9BYV8 373 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 BRD8Q9H0E9 1235 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 MIR1-1HGQ9H1L0 117 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 FBXO44Q9H4M3 255 aa7.97□□□□□ -1.13
LINC00641-202ENST00000555688 INTS9Q9NV88 658 aaKnown RBP7.97□□□□□ -1.13
LINC00641-202ENST00000555688 CACNA2D2Q9NY47 1150 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms