RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 OR52B2Q96RD2 323 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 TINF2Q9BSI4 451 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 COLEC11Q9BWP8 271 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 SPATA16Q9BXB7 569 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 OSBPL2Q9H1P3 480 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 SLC39A10Q9ULF5 831 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 RAB26Q9ULW5 256 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 IPPQ9Y573 584 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 PLXNB2O15031 1838 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 USP12O75317 370 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 ANXA9O76027 345 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 CCNCP24863 283 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 PEX2P28328 305 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 EPHX2P34913 555 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 ALDH1A3P47895 512 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 HSPA13P48723 471 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 CHN2P52757 468 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 ADAM17P78536 824 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 ZBTB17Q13105 803 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 GRB14Q14449 540 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 USP10Q14694 798 aaKnown RBP16.43■□□□□ 0.22
TUBB3-209ENST00000555609 GRM3Q14832 879 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 LSM12Q3MHD2 195 aaKnown RBP16.43■□□□□ 0.22
TUBB3-209ENST00000555609 RASIP1Q5U651 963 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 LPCAT4Q643R3 524 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 WSCD1Q658N2 575 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 USP50Q70EL3 339 aaPredicted RBP16.43■□□□□ 0.22
TUBB3-209ENST00000555609 MOB2Q70IA6 237 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 DSELQ8IZU8 1212 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 ADCY4Q8NFM4 1077 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 CCDC124Q96CT7 223 aaKnown RBP16.43■□□□□ 0.22
TUBB3-209ENST00000555609 FAR2Q96K12 515 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 PPP1R10Q96QC0 940 aaKnown RBP16.43■□□□□ 0.22
TUBB3-209ENST00000555609 WDCPQ9H6R7 721 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 EFCAB1Q9HAE3 211 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 CHRAC1Q9NRG0 131 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 DDIT4Q9NX09 232 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.43■□□□□ 0.22
TUBB3-209ENST00000555609 ACOT9Q9Y305 439 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 DTNAQ9Y4J8 743 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 COMMD3-BMI1R4GMX3 469 aa16.43■□□□□ 0.22
TUBB3-209ENST00000555609 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 TRPC5OSA6NMA1 111 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 YJEFN3A6XGL0 299 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 TARM1B6A8C7 271 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 MAP3K13O43283 966 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 GRID2O43424 1007 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 AP1G2O75843 785 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 PIGNO95427 931 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 NCAM1P13591 858 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 AQP4P55087 323 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 DNAJB13P59910 316 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 PDK3Q15120 406 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 PIGGQ5H8A4 983 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 TCHHL1Q5QJ38 904 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 RARS2Q5T160 578 aaKnown RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 AP1ARQ63HQ0 302 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 POTEHQ6S545 545 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 TMC7Q7Z402 723 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 FAM35AQ86V20 835 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 TP53INP2Q8IXH6 220 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 LZTR1Q8N653 840 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 NPWQ8N729 165 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 NETO2Q8NC67 525 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 RNF169Q8NCN4 708 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 ZSCAN18Q8TBC5 510 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 ATXN7L3BQ96GX2 97 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 FCRL5Q96RD9 977 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 OXCT2Q9BYC2 517 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 UBE2OQ9C0C9 1292 aaKnown RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 CAB39LQ9H9S4 337 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 PIDD1Q9HB75 910 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 MAN1C1Q9NR34 630 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 UTP6Q9NYH9 597 aaKnown RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 PLK2Q9NYY3 685 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 CDH9Q9ULB4 789 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 RUVBL2Q9Y230 463 aaKnown RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 A0A087X1B8 175 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 EME2A4GXA9 379 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 CAPNS1P04632 268 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 MPSTP25325 297 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 NMBRP28336 390 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 GJA5P36382 358 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 NUDT2P50583 147 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 POLE2P56282 527 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 ILF2Q12905 390 aaKnown RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 DLG2Q15700 870 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 ZNF423Q2M1K9 1284 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 ARL13AQ5H913 290 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 LRRC8EQ6NSJ5 796 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 SNX32Q86XE0 403 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 SMG8Q8ND04 991 aaKnown RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 GABPB2Q8TAK5 448 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 SHKBP1Q8TBC3 707 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 SMOQ99835 787 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 DDX50Q9BQ39 737 aaKnown RBP16.42■□□□□ 0.22
TUBB3-209ENST00000555609 SHCBP1LQ9BZQ2 653 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 CRTAC1Q9NQ79 661 aa16.42■□□□□ 0.22
TUBB3-209ENST00000555609 CPSF2Q9P2I0 782 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms