RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 ZP1P60852 638 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 TRAF1Q13077 416 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 CHAF1AQ13111 956 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-216ENST00000555550 GPS2Q13227 327 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 TRIM14Q14142 442 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 KRTAP24-1Q3LI83 254 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 RUNDC3AQ59EK9 446 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 FSCBQ5H9T9 825 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 FAM76BQ5HYJ3 339 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 VWA5B1Q5TIE3 1220 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 SYT13Q7L8C5 426 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 SCN4BQ8IWT1 228 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 KDM1BQ8NB78 822 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 PHF21BQ96EK2 531 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 ZNF333Q96JL9 665 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 MPHOSPH6Q99547 160 aaKnown RBP4.11□□□□□ -1.75
SCFD1-216ENST00000555550 TM6SF1Q9BZW5 370 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 ZNF556Q9HAH1 456 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 ZDHHC7Q9NXF8 308 aa4.11□□□□□ -1.75
SCFD1-216ENST00000555550 PLEKHB1Q9UF11 243 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-216ENST00000555550 H0Y3Z8 333 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 SEPT4O43236 478 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 PRSS2P07478 247 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 HMGB1P09429 215 aaKnown RBP4.1□□□□□ -1.75
SCFD1-216ENST00000555550 UNGP13051 313 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-216ENST00000555550 CHN1P15882 459 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 RFC1P35251 1148 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-216ENST00000555550 PPP3CCP48454 512 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 RPS6KA3P51812 740 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 RBM5P52756 815 aaKnown RBP eCLIP4.1□□□□□ -1.75
SCFD1-216ENST00000555550 CRYZQ08257 329 aaKnown RBP4.1□□□□□ -1.75
SCFD1-216ENST00000555550 UBE4AQ14139 1066 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 DCTN1Q14203 1278 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 TMEM268Q5VZI3 342 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 HEPHL1Q6MZM0 1159 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 PTGR2Q8N8N7 351 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-216ENST00000555550 CEP76Q8TAP6 659 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 BICD2Q8TD16 824 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 C2CD4CQ8TF44 421 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 FAR1Q8WVX9 515 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 APOLD1Q96LR9 279 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 CDT1Q9H211 546 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 KLQ9UEF7 1012 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 DHDHQ9UQ10 334 aa4.1□□□□□ -1.75
SCFD1-216ENST00000555550 E7EVH7 732 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 VWA5AO00534 786 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 STRNO43815 780 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 CBX6O95503 412 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 LCATP04180 440 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 CYP21A2P08686 494 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 PRKCHP24723 683 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 SKIV2L2P42285 1042 aaKnown RBP4.09□□□□□ -1.75
SCFD1-216ENST00000555550 RFX5P48382 616 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-216ENST00000555550 CLCNKBP51801 687 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 ART1P52961 327 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 PMS2P54278 862 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 DSC1Q08554 894 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 DUSP6Q16828 381 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 KRT71Q3SY84 523 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 TMEM71Q6P5X7 295 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 ZNF367Q7RTV3 350 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 GALNT7Q86SF2 657 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 BRSK2Q8IWQ3 736 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 CACNA2D3Q8IZS8 1091 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 OR6Y1Q8NGX8 325 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 STT3BQ8TCJ2 826 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 OTUD7AQ8TE49 926 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-216ENST00000555550 FRG2BQ96QU4 278 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 GFM1Q96RP9 751 aaKnown RBP4.09□□□□□ -1.75
SCFD1-216ENST00000555550 PAGR1Q9BTK6 254 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 ABHD16BQ9H3Z7 469 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 THAP1Q9NVV9 213 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 TAGLN3Q9UI15 199 aa4.09□□□□□ -1.75
SCFD1-216ENST00000555550 A0A1B0GUV1 79 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 CCDC194A0A1B0GVG4 234 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-216ENST00000555550 I6L893 689 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-216ENST00000555550 TFRCP02786 760 aaKnown RBP4.08□□□□□ -1.76
SCFD1-216ENST00000555550 MYZAPP0CAP1 466 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 ACP5P13686 325 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 CDH12P55289 794 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 AADACL2Q6P093 401 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 Q6ZSV7 163 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 WDR5BQ86VZ2 330 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 CSGALNACT1Q8TDX6 532 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 SLC35F5Q8WV83 523 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 KLHL31Q9H511 634 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 PLEKHA2Q9HB19 425 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 SLC22A11Q9NSA0 550 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 GRHPRQ9UBQ7 328 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 UPB1Q9UBR1 384 aa4.08□□□□□ -1.76
SCFD1-216ENST00000555550 SRPRBQ9Y5M8 271 aaKnown RBP4.08□□□□□ -1.76
SCFD1-216ENST00000555550 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 C17orf102A2RUQ5 167 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 DDTLA6NHG4 134 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-216ENST00000555550 FAM90A20PA6NIJ5 464 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 BTBD18B2RXH4 712 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 EYA2O00167 538 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 HSPB6O14558 160 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 RNMTO43148 476 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms