RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 MRPL47Q9HD33 250 aaKnown RBP20.93■□□□□ 0.94
VTI1B-205ENST00000555543 ASCC3Q8N3C0 2202 aaKnown RBP20.92■□□□□ 0.94
VTI1B-205ENST00000555543 LRRC72A6NJI9 287 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 WASH4PA8MWX3 477 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 C1QTNF3-AMACRE9PGA6 284 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 RNF8O76064 485 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 TCF4P15884 667 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 EIF4A3P38919 411 aaKnown RBP20.92■□□□□ 0.94
VTI1B-205ENST00000555543 TPI1P60174 286 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 PPP2CBP62714 309 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 PPP2CAP67775 309 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 SLC20A2Q08357 652 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 POLD3Q15054 466 aaPredicted RBP20.92■□□□□ 0.94
VTI1B-205ENST00000555543 ERMARDQ5T6L9 678 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 AGBL4Q5VU57 503 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 FAM46CQ5VWP2 391 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 LAYNQ6UX15 382 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 GRIN3AQ8TCU5 1115 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 ARRDC3Q96B67 414 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 BTBD6Q96KE9 485 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 CEP44Q9C0F1 390 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 EBF2Q9HAK2 575 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 TM9SF3Q9HD45 589 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 PLXNA2O75051 1894 aa20.92■□□□□ 0.94
VTI1B-205ENST00000555543 PRPSAP2O60256 369 aa20.91■□□□□ 0.94
VTI1B-205ENST00000555543 CYP1A2P05177 515 aa20.91■□□□□ 0.94
VTI1B-205ENST00000555543 KCNA4P22459 653 aa20.91■□□□□ 0.94
VTI1B-205ENST00000555543 CD27P26842 260 aa20.91■□□□□ 0.94
VTI1B-205ENST00000555543 IL1R2P27930 398 aa20.91■□□□□ 0.94
VTI1B-205ENST00000555543 ATXN3P54252 364 aaPredicted RBP20.91■□□□□ 0.94
VTI1B-205ENST00000555543 TRIM14Q14142 442 aa20.91■□□□□ 0.94
VTI1B-205ENST00000555543 CCDC122Q5T0U0 273 aa20.91■□□□□ 0.94
VTI1B-205ENST00000555543 PCDH20Q8N6Y1 951 aaKnown RBP20.91■□□□□ 0.94
VTI1B-205ENST00000555543 HMCESQ96FZ2 354 aa20.91■□□□□ 0.94
VTI1B-205ENST00000555543 CCDC114Q96M63 670 aa20.91■□□□□ 0.94
VTI1B-205ENST00000555543 TM6SF2Q9BZW4 377 aa20.91■□□□□ 0.94
VTI1B-205ENST00000555543 CATSPERBQ9H7T0 1116 aa20.91■□□□□ 0.94
VTI1B-205ENST00000555543 FARP1Q9Y4F1 1045 aaPredicted RBP20.91■□□□□ 0.94
VTI1B-205ENST00000555543 WASF2Q9Y6W5 498 aa20.91■□□□□ 0.94
VTI1B-205ENST00000555543 CXorf51AA0A1B0GTR3 108 aa20.9■□□□□ 0.94
VTI1B-205ENST00000555543 RASA4BC9J798 803 aa20.9■□□□□ 0.94
VTI1B-205ENST00000555543 KPNA3O00505 521 aaPredicted RBP20.9■□□□□ 0.94
VTI1B-205ENST00000555543 FGF10O15520 208 aaPredicted RBP20.9■□□□□ 0.94
VTI1B-205ENST00000555543 RASA4O43374 803 aa20.9■□□□□ 0.94
VTI1B-205ENST00000555543 PLRG1O43660 514 aaKnown RBP20.9■□□□□ 0.94
VTI1B-205ENST00000555543 KDELR3O43731 214 aa20.9■□□□□ 0.94
VTI1B-205ENST00000555543 SYPP08247 313 aa20.9■□□□□ 0.94
VTI1B-205ENST00000555543 CSNK1EP49674 416 aaKnown RBP20.9■□□□□ 0.94
VTI1B-205ENST00000555543 FOXK2Q01167 660 aa20.9■□□□□ 0.94
VTI1B-205ENST00000555543 UMODL1-AS1Q8N2C9 162 aa20.9■□□□□ 0.94
VTI1B-205ENST00000555543 TMIEQ8NEW7 156 aa20.9■□□□□ 0.94
VTI1B-205ENST00000555543 OR8K1Q8NGG5 319 aa20.9■□□□□ 0.94
VTI1B-205ENST00000555543 NUP85Q9BW27 656 aa20.9■□□□□ 0.94
VTI1B-205ENST00000555543 IL36AQ9UHA7 158 aa20.9■□□□□ 0.94
VTI1B-205ENST00000555543 A0A1B0GVT2 93 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 A0A1W2PPC4 97 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 EEF2KO00418 725 aaKnown RBP20.89■□□□□ 0.93
VTI1B-205ENST00000555543 SLC7A4O43246 635 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 MFAP3LO75121 409 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 LEFTY1O75610 366 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 GJB3O75712 270 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 PRNPP04156 253 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 HTR7P34969 479 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 PCK1P35558 622 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 RECQLP46063 649 aaPredicted RBP20.89■□□□□ 0.93
VTI1B-205ENST00000555543 DNA2P51530 1060 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 AFF3P51826 1226 aaKnown RBP20.89■□□□□ 0.93
VTI1B-205ENST00000555543 CCNHP51946 323 aaPredicted RBP20.89■□□□□ 0.93
VTI1B-205ENST00000555543 TAS2R38P59533 333 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 ASTE1Q2TB18 679 aaPredicted RBP20.89■□□□□ 0.93
VTI1B-205ENST00000555543 CARD16Q5EG05 197 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 ARSIQ5FYB1 569 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 PIP5KL1Q5T9C9 394 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 ZNF354CQ86Y25 554 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 NETO2Q8NC67 525 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 VOPP1Q96AW1 172 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 ISG20Q96AZ6 181 aaKnown RBP20.89■□□□□ 0.93
VTI1B-205ENST00000555543 PACSIN1Q9BY11 444 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 IL21RQ9HBE5 538 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 OSGEPQ9NPF4 335 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 ABHD10Q9NUJ1 306 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 DNAAF2Q9NVR5 837 aaKnown RBP20.89■□□□□ 0.93
VTI1B-205ENST00000555543 ANAPC7Q9UJX3 599 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 HPCAL4Q9UM19 191 aa20.89■□□□□ 0.93
VTI1B-205ENST00000555543 TBC1D3DA0A087WVF3 549 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 TBC1D3IA0A087WXS9 549 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 TBC1D3EA0A087X179 549 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 TBC1D3KA0A087X1G2 549 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 TBC1D3FA6NER0 549 aaPredicted RBP20.88■□□□□ 0.93
VTI1B-205ENST00000555543 EIF3CLB5ME19 914 aaKnown RBP20.88■□□□□ 0.93
VTI1B-205ENST00000555543 TBC1D3LB9A6J9 549 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 GIPC1O14908 333 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 KCNK5O95279 499 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 TBC1D3HP0C7X1 549 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 CCR5P51681 352 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 GEMIN4P57678 1058 aaKnown RBP20.88■□□□□ 0.93
VTI1B-205ENST00000555543 YBEYP58557 167 aaPredicted RBP20.88■□□□□ 0.93
VTI1B-205ENST00000555543 SERINC3Q13530 473 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 SMTNL2Q2TAL5 461 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 PARP15Q460N3 678 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms