RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	SETD1B	Q9UPS6	1966 aa	Known RBP	4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	OR6C68	A6NDL8	312 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	SMIM22	K7EJ46	135 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	C1QL1	O75973	258 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	MLYCD	O95822	493 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	ALOX12	P18054	663 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	HOXD13	P35453	343 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	PTPN9	P43378	593 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	RARS	P54136	660 aa	Known RBP	4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	RPL7A	P62424	266 aa	Known RBP	4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	MTA1	Q13330	715 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	RPE65	Q16518	533 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	CCNG2	Q16589	344 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	FBXO43	Q4G163	708 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	GHDC	Q8N2G8	530 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	PIGK	Q92643	395 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	USP6NL	Q92738	828 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	KAT2B	Q92831	832 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	PIP5K1A	Q99755	562 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	TM2D2	Q9BX73	214 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	MUC13	Q9H3R2	512 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	EIF2B3	Q9NR50	452 aa	Known RBP	4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	SEMA4G	Q9NTN9	838 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	HAUS2	Q9NVX0	235 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	ASB6	Q9NWX5	421 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	PTGFRN	Q9P2B2	879 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	VPS28	Q9UK41	221 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	TNFSF13B	Q9Y275	285 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	GTPBP1	O00178	669 aa	Known RBP	4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	LDLRAD4	O15165	306 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	SEC14L2	O76054	403 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	ADA	P00813	363 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	IGLV2-14	P01704	120 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	SPARC	P09486	303 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	ST6GAL1	P15907	406 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	ICAM3	P32942	547 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	SKIV2L2	P42285	1042 aa	Known RBP	4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	CTCF	P49711	727 aa	Predicted RBP	4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	BLK	P51451	505 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	C5orf22	Q49AR2	442 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	FAM171A1	Q5VUB5	890 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	SUMO4	Q6EEV6	95 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	KLHL24	Q6TFL4	600 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	ARHGEF25	Q86VW2	580 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	PDILT	Q8N807	584 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	C11orf65	Q8NCR3	313 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	DNAAF1	Q8NEP3	725 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	ZNF398	Q8TD17	642 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	ERP27	Q96DN0	273 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	KLHL15	Q96M94	604 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	FRG2B	Q96QU4	278 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	IFT27	Q9BW83	186 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	ENTPD7	Q9NQZ7	604 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	SEPT11	Q9NVA2	429 aa	Known RBP	4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	TBC1D29	Q9UFV1	150 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	POLG2	Q9UHN1	485 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	CLDN16	Q9Y5I7	305 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	RUSC2	Q8N2Y8	1516 aa		4.68	□□□□□ -1.66
KTN1-222	ENST00000555506	RSF1	Q96T23	1441 aa	Predicted RBP	4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	PABPN1L	A6NDY0	278 aa	Known RBP	4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	LRRC3C	A6NJW4	275 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	AP3D1	O14617	1153 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	MSI1	O43347	362 aa	Known RBP	4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	USP12	O75317	370 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	RNF8	O76064	485 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	CBX6	O95503	412 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	PLAU	P00749	431 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	SERPINC1	P01008	464 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	GALT	P07902	379 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	CYP2A6	P11509	494 aa	Predicted RBP	4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	FBL	P22087	321 aa	Known RBP	4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	HOXA7	P31268	230 aa	Predicted RBP	4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	FMO4	P31512	558 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	CPOX	P36551	454 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	CYP2J2	P51589	502 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	NUCB1	Q02818	461 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	GALNT3	Q14435	633 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	PLK5	Q496M5	336 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	KIAA1755	Q5JYT7	1200 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	IL20RB	Q6UXL0	311 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	PRSS45	Q7RTY3	260 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	CCDC105	Q8IYK2	499 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	TMEM217	Q8N7C4	229 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	PNLDC1	Q8NA58	520 aa	Known RBP	4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	ASB2	Q96Q27	587 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	MLXIPL	Q9NP71	852 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	ATP8A2	Q9NTI2	1148 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	NLK	Q9UBE8	527 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	HSPB7	Q9UBY9	170 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	FBXO40	Q9UH90	709 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	SLC8A2	Q9UPR5	921 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	ICK	Q9UPZ9	632 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	LYVE1	Q9Y5Y7	322 aa		4.67	□□□□□ -1.66
KTN1-222	ENST00000555506	SLC22A23	A1A5C7	686 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	CXorf65	A6NEN9	183 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	INPPL1	O15357	1258 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	TMCC2	O75069	709 aa		4.66	□□□□□ -1.66
KTN1-222	ENST00000555506	TACC1	O75410	805 aa		4.66	□□□□□ -1.66

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