RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 GRK7Q8WTQ7 553 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 RPL10LQ96L21 214 aaKnown RBP10.09□□□□□ -0.79
PSEN1-213ENST00000555386 ACOX2Q99424 681 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 NCAPGQ9BPX3 1015 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 TMEM109Q9BVC6 243 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 CALN1Q9BXU9 219 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 SLC2A11Q9BYW1 496 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 PABPC3Q9H361 631 aaKnown RBP10.09□□□□□ -0.79
PSEN1-213ENST00000555386 NDFIP2Q9NV92 336 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 TMEM51Q9NW97 253 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 ELOVL2Q9NXB9 296 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 GRHL1Q9NZI5 618 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 KIAA1522Q9P206 1035 aaPredicted RBP10.09□□□□□ -0.79
PSEN1-213ENST00000555386 VPS28Q9UK41 221 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 FBXO10Q9UK96 956 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 RAD54BQ9Y620 910 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 ATXN2Q99700 1313 aaKnown RBP10.08□□□□□ -0.8
PSEN1-213ENST00000555386 A0A0D9SEW6 157 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 DRGXA6NNA5 263 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 EBAG9O00559 213 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 ECEL1O95672 775 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 CD48P09326 243 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 L1CAMP32004 1257 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 MDH1P40925 334 aaKnown RBP10.08□□□□□ -0.8
PSEN1-213ENST00000555386 PXNP49023 591 aaPredicted RBP10.08□□□□□ -0.8
PSEN1-213ENST00000555386 PMS2P54278 862 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 AIF1P55008 147 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 SATB1Q01826 763 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 CAV1Q03135 178 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 MMRN1Q13201 1228 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 LLGL1Q15334 1064 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 FBXO43Q4G163 708 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 BOLA3Q53S33 107 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 PITRM1Q5JRX3 1037 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 MANEALQ5VSG8 457 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 HEATR6Q6AI08 1181 aaKnown RBP10.08□□□□□ -0.8
PSEN1-213ENST00000555386 TTC27Q6P3X3 843 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 ZDHHC24Q6UX98 284 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 B4GALNT4Q76KP1 1039 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 ADIPOR2Q86V24 386 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 AHI1Q8N157 1196 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 SH2D3CQ8N5H7 860 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 BCAS4Q8TDM0 211 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 USP33Q8TEY7 942 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 UCMAQ8WVF2 138 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 ART4Q93070 314 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 CLDN23Q96B33 292 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 HHIPQ96QV1 700 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 OSBPL6Q9BZF3 934 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 EPN3Q9H201 632 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 CHRDQ9H2X0 955 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 CNOT10Q9H9A5 744 aaKnown RBP10.08□□□□□ -0.8
PSEN1-213ENST00000555386 DLGAP2Q9P1A6 1054 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 WHRNQ9P202 907 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 INTS6Q9UL03 887 aaKnown RBP10.08□□□□□ -0.8
PSEN1-213ENST00000555386 SLC27A6Q9Y2P4 619 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 RRP15Q9Y3B9 282 aaKnown RBP10.08□□□□□ -0.8
PSEN1-213ENST00000555386 MFHAS1Q9Y4C4 1052 aa10.08□□□□□ -0.8
PSEN1-213ENST00000555386 IGLV3-10A0A075B6K4 115 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 H3BRJ5 948 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 SGK1O00141 431 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 CBX4O00257 560 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 LAMTOR5O43504 91 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 BNIP3LO60238 219 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 SNAP91O60641 907 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 KRT1P04264 644 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 HLA-EP13747 358 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 RHOQP17081 205 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 AMPD1P23109 780 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 GLDCP23378 1020 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 LSP1P33241 339 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 ACVRL1P37023 503 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 ARL4AP40617 200 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 CETN2P41208 172 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 KIR2DL1P43626 348 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-213ENST00000555386 RPL21P46778 160 aaKnown RBP10.07□□□□□ -0.8
PSEN1-213ENST00000555386 RPS9P46781 194 aaKnown RBP10.07□□□□□ -0.8
PSEN1-213ENST00000555386 STK19P49842 368 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-213ENST00000555386 PLTPP55058 493 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 CSTF1Q05048 431 aaKnown RBP10.07□□□□□ -0.8
PSEN1-213ENST00000555386 IFFO1Q0D2I5 559 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 CALCOCO2Q13137 446 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 BYSLQ13895 437 aaKnown RBP10.07□□□□□ -0.8
PSEN1-213ENST00000555386 ZNF234Q14588 700 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 PLEKHG6Q3KR16 790 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 ARTNQ5T4W7 220 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 C6orf118Q5T5N4 469 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 ACBD5Q5T8D3 534 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-213ENST00000555386 DENND2CQ68D51 928 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 IL31Q6EBC2 164 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 SDE2Q6IQ49 451 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 AADACL2Q6P093 401 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 SERPINA13PQ6UXR4 307 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 LINGO4Q6UY18 593 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 RFX8Q6ZV50 586 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 ADAT2Q7Z6V5 191 aaKnown RBP10.07□□□□□ -0.8
PSEN1-213ENST00000555386 CACUL1Q86Y37 369 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 RHOT1Q8IXI2 618 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 KATNAL2Q8IYT4 538 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 ZNF557Q8N988 423 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms