RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 PLOD1Q02809 727 aaPredicted RBP10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 TRAP1Q12931 704 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 CA9Q16790 459 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 MGAT5BQ3V5L5 792 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 ZBED5Q49AG3 693 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 PPP6R3Q5H9R7 873 aaPredicted RBP10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 ALKAL1Q6UXT8 129 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 SNX32Q86XE0 403 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 LZTR1Q8N653 840 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 EME1Q96AY2 570 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 HSPBAP1Q96EW2 488 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 ZMAT2Q96NC0 199 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 SHCBP1LQ9BZQ2 653 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 ILKAPQ9H0C8 392 aaPredicted RBP10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 SNX25Q9H3E2 840 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 ABHD16BQ9H3Z7 469 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 WDR41Q9HAD4 459 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 CLK4Q9HAZ1 481 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 FAM49BQ9NUQ9 324 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 TMEM216Q9P0N5 145 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 TXNDC16Q9P2K2 825 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 PCDHGB4Q9UN71 923 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 AP4E1Q9UPM8 1137 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 PCDHGB5Q9Y5G0 923 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 MCM3APO60318 1980 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 PIRO00625 290 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 KLHL41O60662 606 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 DNAJB1P25685 340 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 ARRB2P32121 409 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 GJA5P36382 358 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 GNL1P36915 607 aaPredicted RBP10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 IRF5Q13568 498 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 PPP2R5DQ14738 602 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 KIZQ2M2Z5 673 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 SOWAHAQ2M3V2 549 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 ZNF829Q3KNS6 432 aaPredicted RBP10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 SLC9B1Q4ZJI4 515 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 FBXO47Q5MNV8 452 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 VWA5B1Q5TIE3 1220 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 HEATR6Q6AI08 1181 aaKnown RBP10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 KRT80Q6KB66 452 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 NCCRP1Q6ZVX7 275 aaPredicted RBP10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 GPR141Q7Z602 305 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 DPP9Q86TI2 863 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 PACRGLQ8N7B6 248 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 ZNF781Q8N8C0 355 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 TDRD5Q8NAT2 981 aaKnown RBP10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 TNIP2Q8NFZ5 429 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 TNIP3Q96KP6 325 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 EFHD1Q9BUP0 239 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 HIPK3Q9H422 1215 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 DHX35Q9H5Z1 703 aaKnown RBP10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 C8orf4Q9NR00 106 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 RNF11Q9Y3C5 154 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 NRCAMQ92823 1304 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 TRIM64A6NGJ6 449 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 PDHXO00330 501 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 GPR32O75388 356 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 TRPA1O75762 1119 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 TOP3BO95985 862 aaKnown RBP10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 HSPA1AP0DMV8 641 aaKnown RBP10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 HSPA1BP0DMV9 641 aaKnown RBP10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 DARSP14868 501 aaKnown RBP10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 SMPD1P17405 629 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 ARL4AP40617 200 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 HADHAP40939 763 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 ART3Q13508 389 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 CEACAM7Q14002 265 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 IKBKEQ14164 716 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 SV2CQ496J9 727 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 SPANXN3Q5MJ09 141 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 SEL1L3Q68CR1 1132 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 ATG14Q6ZNE5 492 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 COLGALT2Q8IYK4 626 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 MPP5Q8N3R9 675 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 C7orf31Q8N865 590 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 DQX1Q8TE96 717 aaKnown RBP10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 CSPG4P5Q96PW8 444 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 CCDC68Q9H2F9 335 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 ZBTB26Q9HCK0 441 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 PLXNB2O15031 1838 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 CITO14578 2027 aa10.86□□□□□ -0.67
MTHFD1-210ENST00000555252 MYO18AQ92614 2054 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 CCDC162PA2VCL2 907 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 PPEF2O14830 753 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 XPO1O14980 1071 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 ZMPSTE24O75844 475 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 GABBR2O75899 941 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 DGKIO75912 1065 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 BAIAP3O94812 1187 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 METTL18O95568 372 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 KCNE1P15382 129 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 EPHX2P34913 555 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 SPRP35270 261 aaPredicted RBP10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 CD151P48509 253 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 TAF6P49848 677 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 RPL14P50914 215 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 GTF2A2P52657 109 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms