RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TUBA1BP68363 451 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 MMRN1Q13201 1228 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 PPP4R4Q6NUP7 873 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 EPGNQ6UW88 154 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 C4orf22Q6V702 233 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 KCTD8Q6ZWB6 473 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 TUBA1AQ71U36 451 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 ZSCAN18Q8TBC5 510 aaPredicted RBP15.89■□□□□ 0.13
SYNE3-203ENST00000554873 CALN1Q9BXU9 219 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 WDR41Q9HAD4 459 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 GDAP2Q9NXN4 497 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 SNX13Q9Y5W8 968 aa15.89■□□□□ 0.13
SYNE3-203ENST00000554873 M0QX08 132 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 NUAK1O60285 661 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 ENO3P13929 434 aaPredicted RBP15.88■□□□□ 0.13
SYNE3-203ENST00000554873 KCNA4P22459 653 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 TUFMP49411 452 aaKnown RBP15.88■□□□□ 0.13
SYNE3-203ENST00000554873 TFAMQ00059 246 aaKnown RBP15.88■□□□□ 0.13
SYNE3-203ENST00000554873 KCNJ11Q14654 390 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 FER1L6Q2WGJ9 1857 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 PGS1Q32NB8 556 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 INAVAQ3KP66 663 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 DARS2Q6PI48 645 aaKnown RBP15.88■□□□□ 0.13
SYNE3-203ENST00000554873 ATG14Q6ZNE5 492 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 BTLAQ7Z6A9 289 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 KIAA2013Q8IYS2 634 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 CNDP1Q96KN2 507 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 NIFKQ9BYG3 293 aaKnown RBP15.88■□□□□ 0.13
SYNE3-203ENST00000554873 XYLT2Q9H1B5 865 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 PSME2Q9UL46 239 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 TOP3BO95985 862 aaKnown RBP15.88■□□□□ 0.13
SYNE3-203ENST00000554873 GLDCP23378 1020 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 BMPR1AP36894 532 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 HARS2P49590 506 aaKnown RBP15.88■□□□□ 0.13
SYNE3-203ENST00000554873 OCA2Q04671 838 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 ZNF699Q32M78 642 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 FAXCQ5TGI0 409 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 XYLT1Q86Y38 959 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 GALNT13Q8IUC8 556 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 AGBL3Q8NEM8 1001 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 ZC3H15Q8WU90 426 aaKnown RBP15.88■□□□□ 0.13
SYNE3-203ENST00000554873 TRIB2Q92519 343 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 RCN3Q96D15 328 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 LHX5Q9H2C1 402 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 COG4Q9H9E3 785 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 THG1LQ9NWX6 298 aaKnown RBP15.88■□□□□ 0.13
SYNE3-203ENST00000554873 TBC1D14Q9P2M4 693 aa15.88■□□□□ 0.13
SYNE3-203ENST00000554873 ZNF214Q9UL59 606 aaPredicted RBP15.88■□□□□ 0.13
SYNE3-203ENST00000554873 TEX28O15482 410 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 MSCO60682 206 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 TRUB2O95900 331 aaKnown RBP15.87■□□□□ 0.13
SYNE3-203ENST00000554873 DPP6P42658 865 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 NME5P56597 212 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 ABCE1P61221 599 aaKnown RBP15.87■□□□□ 0.13
SYNE3-203ENST00000554873 FSTL1Q12841 308 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 GRM1Q13255 1194 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 PTK2BQ14289 1009 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 ATAD3BQ5T9A4 648 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 MROH9Q5TGP6 573 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 SLC9A4Q6AI14 798 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 ZPBP2Q6X784 338 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 GET4Q7L5D6 327 aaPredicted RBP15.87■□□□□ 0.13
SYNE3-203ENST00000554873 ABHD11Q8NFV4 315 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 UHRF1Q96T88 793 aaPredicted RBP15.87■□□□□ 0.13
SYNE3-203ENST00000554873 GPN2Q9H9Y4 310 aaPredicted RBP15.87■□□□□ 0.13
SYNE3-203ENST00000554873 BRWD3Q6RI45 1802 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 SIP14410 1827 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 SLC22A1O15245 554 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 GNAO1P09471 354 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 CD1EP15812 388 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 PROZP22891 400 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 CXCR2P25025 360 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 RAP1GAPP47736 663 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 CHRNEQ04844 493 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 SLC10A2Q12908 348 aaPredicted RBP15.87■□□□□ 0.13
SYNE3-203ENST00000554873 ORC1Q13415 861 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 RNF19BQ6ZMZ0 732 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 TIFABQ6ZNK6 161 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 TAS2R42Q7RTR8 314 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 AKAP14Q86UN6 197 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 TTC30BQ8N4P2 665 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 GOLM1Q8NBJ4 401 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 OR13F1Q8NGS4 319 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 ASB9Q96DX5 294 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 EGLN2Q96KS0 407 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 RAD21L1Q9H4I0 556 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 PCDH12Q9NPG4 1184 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 SCUBE2Q9NQ36 999 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.87■□□□□ 0.13
SYNE3-203ENST00000554873 EMCNQ9ULC0 261 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 USP18Q9UMW8 372 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 CROCCQ5TZA2 2017 aa15.87■□□□□ 0.13
SYNE3-203ENST00000554873 HMX2A2RU54 273 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 TRIM38O00635 465 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 TIMM44O43615 452 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 EEF1DP29692 281 aaKnown RBP15.86■□□□□ 0.13
SYNE3-203ENST00000554873 CDH8P55286 799 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 ROR1Q01973 937 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 RHDQ02161 417 aa15.86■□□□□ 0.13
SYNE3-203ENST00000554873 RFTN1Q14699 578 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms