RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PIGSQ96S52 555 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PRSS22Q9GZN4 317 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 NOD2Q9HC29 1040 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 RASSF1Q9NS23 344 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PGAP2Q9UHJ9 254 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 LZTS1Q9Y250 596 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 RRP7AQ9Y3A4 280 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 LTN1O94822 1766 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 RGPD2P0DJD1 1756 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CEP290O15078 2479 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CYP3A7-CYP3A51PA0A087WV96 503 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 UBE2Q2LH0YL09 131 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PRYO14603 147 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 KAT7O95251 611 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 ALDOAP04075 364 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 POLBP06746 335 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CYP3A7P24462 503 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CNTFP26441 200 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 NDUFS1P28331 727 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PTGER1P34995 402 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 HOXD12P35452 270 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 STAT6P42226 847 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 VPS41P49754 854 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 SLC14A1Q13336 389 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 ANKRD1Q15327 319 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CTXN3Q4LDR2 81 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 LRRC24Q50LG9 513 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 ZNF484Q5JVG2 852 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CC2D1BQ5T0F9 858 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 SLC39A5Q6ZMH5 540 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 LRRTM4Q86VH4 590 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CNGA4Q8IV77 575 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CPOQ8IVL8 374 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PTGR2Q8N8N7 351 aaPredicted RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 SLC2A12Q8TD20 617 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CLEC4CQ8WTT0 213 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 IGFBPL1Q8WX77 278 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 ASB12Q8WXK4 309 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 HERVK_113Q902F9 699 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 ABHD8Q96I13 439 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 MAELQ96JY0 434 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 TWNKQ96RR1 684 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 NAP1L4Q99733 375 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 NPAS1Q99742 590 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 EIF2AK1Q9BQI3 630 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 SEMA4CQ9C0C4 833 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PRDM16Q9HAZ2 1276 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PLEKHA2Q9HB19 425 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PDE11AQ9HCR9 933 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 NRIP3Q9NQ35 241 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 ASNSD1Q9NWL6 643 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 ELOVL5Q9NYP7 299 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PDP2Q9P2J9 529 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 MAFFQ9ULX9 164 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 RCE1Q9Y256 329 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 B3GNT3Q9Y2A9 372 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 HEMK1Q9Y5R4 338 aaPredicted RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 COPG1Q9Y678 874 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 WDR17Q8IZU2 1322 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 CRB1P82279 1406 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 PRAG1Q86YV5 1406 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 YTHDC2Q9H6S0 1430 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 ATP7BP35670 1465 aa1.69□□□□□ -2.14
PRPF39-208ENST00000554785 TNRC6CQ9HCJ0 1690 aaKnown RBP1.69□□□□□ -2.14
PRPF39-208ENST00000554785 TRIOBPQ9H2D6 2365 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 SBF1O95248 1867 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 TAF1LQ8IZX4 1826 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 CICQ96RK0 1608 aaPredicted RBP1.68□□□□□ -2.14
PRPF39-208ENST00000554785 USP6P35125 1406 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 VPS8Q8N3P4 1428 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 SBNO1A3KN83 1393 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 CYP2D7A0A087X1C5 515 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 SAC3D1A6NKF1 404 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 C16orf96A6NNT2 1141 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 STX16-NPEPL1H3BU86 382 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 STX16O14662 325 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 PPEF2O14830 753 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 SH3BP5O60239 455 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 NTN1O95631 604 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 AGR2O95994 175 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 IGKV2-30P06310 120 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 CHRM5P08912 532 aaPredicted RBP1.68□□□□□ -2.14
PRPF39-208ENST00000554785 CNPP09543 421 aaKnown RBP1.68□□□□□ -2.14
PRPF39-208ENST00000554785 CHN1P15882 459 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 IGFBP2P18065 325 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 ATP5F1P24539 256 aaPredicted RBP1.68□□□□□ -2.14
PRPF39-208ENST00000554785 HOXD9P28356 352 aaPredicted RBP1.68□□□□□ -2.14
PRPF39-208ENST00000554785 ZNF84P51523 738 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 SLC37A1P57057 533 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 TLE2Q04725 743 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 UBE3AQ05086 875 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 RABEP1Q15276 862 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 DLGAP5Q15398 846 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 SEC23BQ15437 767 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 PFKFB3Q16875 520 aaPredicted RBP1.68□□□□□ -2.14
PRPF39-208ENST00000554785 CERKLQ49MI3 558 aaPredicted RBP1.68□□□□□ -2.14
PRPF39-208ENST00000554785 GLE1Q53GS7 698 aaKnown RBP1.68□□□□□ -2.14
PRPF39-208ENST00000554785 AWAT2Q6E213 333 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 RANBP10Q6VN20 620 aa1.68□□□□□ -2.14
PRPF39-208ENST00000554785 TECPR1Q7Z6L1 1165 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms