RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 TRIM48Q8IWZ4 208 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 STAG3L4Q8TBR4 150 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 ATXN3LQ9H3M9 355 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 KANSL3Q9P2N6 904 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 CLCN5P51795 746 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 STX4Q12846 297 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 TIMM50Q3ZCQ8 353 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 HYIQ5T013 277 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 FAM183BPQ6ZVS7 135 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 ZNF605Q86T29 641 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 REPS1Q96D71 796 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 PANX3Q96QZ0 392 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 SNRNP25Q9BV90 132 aaKnown RBP14.14□□□□□ -0.15
VTI1B-204ENST00000554659 DGCR6LQ9BY27 220 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 POLR1EQ9GZS1 481 aaKnown RBP14.14□□□□□ -0.15
VTI1B-204ENST00000554659 ZNF624Q9P2J8 865 aaPredicted RBP14.14□□□□□ -0.15
VTI1B-204ENST00000554659 BCL9O00512 1426 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 HDAC3O15379 428 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 ROR2Q01974 943 aaKnown RBP14.13□□□□□ -0.15
VTI1B-204ENST00000554659 TNK2Q07912 1038 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 SREBF2Q12772 1141 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 FAM187BQ17R55 369 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 ATP13A4Q4VNC1 1196 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 IL27RAQ6UWB1 636 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 UNC5AQ6ZN44 842 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 TTC7BQ86TV6 843 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 MCOLN3Q8TDD5 553 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 TPD52L3Q96J77 140 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 HSFY1Q96LI6 401 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 CATSPERZQ9NTU4 200 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 NFASCO94856 1347 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 FGFR3P22607 806 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 GRIA4P48058 902 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 SLC15A2Q16348 729 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 DNAJC14Q6Y2X3 702 aaPredicted RBP14.13□□□□□ -0.15
VTI1B-204ENST00000554659 PIWIL4Q7Z3Z4 852 aaKnown RBP14.13□□□□□ -0.15
VTI1B-204ENST00000554659 ULK2Q8IYT8 1036 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 ZNF483Q8TF39 744 aaPredicted RBP14.13□□□□□ -0.15
VTI1B-204ENST00000554659 SPON1Q9HCB6 807 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 ETAA1Q9NY74 926 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 OPTCQ9UBM4 332 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 PRPF19Q9UMS4 504 aaKnown RBP14.13□□□□□ -0.15
VTI1B-204ENST00000554659 RIC1Q4ADV7 1423 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 ABLIM1O14639 778 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 OR56A5P0C7T3 313 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 HUNKP57058 714 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 DDI2Q5TDH0 399 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 MFSD5Q6N075 450 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 ZNF544Q6NX49 715 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 CACTIN-AS1Q8N1I8 211 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 CAPSLQ8WWF8 208 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 ULBP1Q9BZM6 244 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 MBD2Q9UBB5 411 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 VAV3Q9UKW4 847 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 ARHGEF28Q8N1W1 1705 aaKnown RBP14.13□□□□□ -0.15
VTI1B-204ENST00000554659 UMODL1Q5DID0 1318 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 ITGB6P18564 788 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 FMO4P31512 558 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 EPHB3P54753 998 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 IL2P60568 153 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 TMEM159Q96B96 161 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 TSEN34Q9BSV6 310 aaKnown RBP14.13□□□□□ -0.15
VTI1B-204ENST00000554659 POLR1BQ9H9Y6 1135 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 TMEM216Q9P0N5 145 aa14.13□□□□□ -0.15
VTI1B-204ENST00000554659 RTN3O95197 1032 aaPredicted RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 HOXC6P09630 235 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 VEGFAP15692 232 aaPredicted RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 GRIA3P42263 894 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 BNIP2Q12982 314 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 DGCR6Q14129 220 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 TAB1Q15750 504 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 MFSD4BQ5TF39 518 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 FKBP1CQ5VVH2 108 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 BROXQ5VW32 411 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 ABRAXAS1Q6UWZ7 409 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 C15orf52Q6ZUT6 534 aaKnown RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 SLC41A1Q8IVJ1 513 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 NKAPQ8N5F7 415 aaKnown RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 TRAPPC12Q8WVT3 735 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 ALG3Q92685 438 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 ALG9Q9H6U8 611 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 REEP1Q9H902 201 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 SLCO1B3Q9NPD5 702 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 ZNF112Q9UJU3 913 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 TNFSF13BQ9Y275 285 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 UBIAD1Q9Y5Z9 338 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 TTLL13PA6NNM8 815 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 H3BN98 237 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 SNAP91O60641 907 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 LCA5LO95447 670 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 HPGDP15428 266 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 RIPK1Q13546 671 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 UBAP2LQ14157 1087 aaKnown RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 STARD3Q14849 445 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 INO80DQ53TQ3 878 aaPredicted RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 ZCCHC8Q6NZY4 707 aaKnown RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 IZUMO1Q8IYV9 350 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 WDR60Q8WVS4 1066 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 DNAJB3Q8WWF6 145 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 WDR18Q9BV38 432 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms