RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 CLCA1A8K7I4 914 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TLX3O43711 291 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ITGB1P05556 798 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 SERPINB1P30740 379 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 BUD31P41223 144 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ATP1A4Q13733 1029 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RAET1LQ5VY80 246 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 AADACL2Q6P093 401 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CDC73Q6P1J9 531 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF613Q6PF04 617 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TMED8Q6PL24 325 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 SLC20A1Q8WUM9 679 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CAPNS2Q96L46 248 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 FCRL4Q96PJ5 515 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ECSITQ9BQ95 431 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RAB6BQ9NRW1 208 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 GID8Q9NWU2 228 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 VNN3Q9NY84 501 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 IKZF2Q9UKS7 526 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TAF1P21675 1872 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 B2RBV5 119 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TRIM49D1C9J1S8 452 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 POLR2EP19388 210 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 NT5EP21589 574 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 HSPA14Q0VDF9 509 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CHD3Q12873 2000 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 VHLLQ6RSH7 139 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TMEM35BQ8NCS4 154 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ZFRQ96KR1 1074 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 AIF1LQ9BQI0 150 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CUEDC2Q9H467 287 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 AAASQ9NRG9 546 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 FBXO9Q9UK97 447 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 NOX1Q9Y5S8 564 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 A0A1W2PRG6 482 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 KPNA4O00629 521 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CCNDBP1O95273 360 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CXCL8P10145 99 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 SPINK2P20155 84 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PTPN6P29350 595 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 YAP1P46937 504 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PLA2G4AP47712 749 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 SHISA6Q6ZSJ9 500 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RNF180Q86T96 592 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 LRRC49Q8IUZ0 686 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RASGRP3Q8IV61 690 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 THRSPQ92748 146 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CHFRQ96EP1 664 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PTCD3Q96EY7 689 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TGS1Q96RS0 853 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RBAKQ9NYW8 714 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ULK1O75385 1050 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 SOX30O94993 753 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 FTLP02792 175 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 EPHB2P29323 1055 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 GNALP38405 381 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PSMD7P51665 324 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 FMO1Q01740 532 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CCL14Q16627 93 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 HAGHLQ6PII5 290 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MFSD7Q6UXD7 560 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF621Q6ZSS3 439 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 SLC4A11Q8NBS3 891 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MUC13Q9H3R2 512 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ETNK1Q9HBU6 452 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ABCC11Q96J66 1382 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RGS2P41220 211 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CBX5P45973 191 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 AFF3P51826 1226 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 NTHL1P78549 312 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 DSG2Q14126 1118 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 PPP1R2P3Q6NXS1 205 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ADGRD2Q7Z7M1 963 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RCOR2Q8IZ40 523 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ATG16L2Q8NAA4 619 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 GIPC3Q8TF64 312 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 EIF2AK1Q9BQI3 630 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 GLT8D2Q9H1C3 349 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 KCNS2Q9ULS6 477 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TCF20Q9UGU0 1960 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ASXL1Q8IXJ9 1541 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 AFDNP55196 1824 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CYB561D2O14569 222 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ANXA5P08758 320 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 EPHB3P54753 998 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TDRD10Q5VZ19 366 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CREG2Q8IUH2 290 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RTKN2Q8IZC4 609 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CNTD1Q8N815 330 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 FAM84BQ96KN1 310 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CLEC4MQ9H2X3 399 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 NOD2Q9HC29 1040 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TAS2R1Q9NYW7 299 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 NR2F1P10589 423 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PRKAR1BP31321 381 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 DGCR6Q14129 220 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CRY1Q16526 586 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 UBE2UQ5VVX9 321 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 MAMSTRQ6ZN01 415 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms