RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 SCAMP5Q8TAC9 235 aa14.8□□□□□ -0.04
ACTN1-211ENST00000553882 PGAP3Q96FM1 320 aaPredicted RBP14.8□□□□□ -0.04
ACTN1-211ENST00000553882 GPR22Q99680 433 aa14.8□□□□□ -0.04
ACTN1-211ENST00000553882 NUDT5Q9UKK9 219 aa14.8□□□□□ -0.04
ACTN1-211ENST00000553882 ST3GAL5Q9UNP4 418 aa14.8□□□□□ -0.04
ACTN1-211ENST00000553882 RUVBL2Q9Y230 463 aaKnown RBP14.8□□□□□ -0.04
ACTN1-211ENST00000553882 RAD54BQ9Y620 910 aa14.8□□□□□ -0.04
ACTN1-211ENST00000553882 TTC3P53804 2025 aa14.8□□□□□ -0.04
ACTN1-211ENST00000553882 MAGEB16A2A368 324 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 ARL5CA6NH57 179 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 SLC35E2BP0CK96 405 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 RAG1P15918 1043 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 CPT1AP50416 773 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 CSE1LP55060 971 aaKnown RBP14.79□□□□□ -0.04
ACTN1-211ENST00000553882 PRPSAP1Q14558 356 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 FBXW8Q8N3Y1 598 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 FSTL5Q8N475 847 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-211ENST00000553882 TMEM151AQ8N4L1 468 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 TUBGCP5Q96RT8 1024 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 TSPAN18Q96SJ8 248 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 OMDQ99983 421 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 MCMBPQ9BTE3 642 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 DNAJB4Q9UDY4 337 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 SLC2A6Q9UGQ3 507 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 ZDHHC2Q9UIJ5 367 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 TMEM114B3SHH9 223 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 F9P00740 461 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 LYNP07948 512 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 GRIK3Q13003 919 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 EML3Q32P44 896 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 LSM12Q3MHD2 195 aaKnown RBP14.79□□□□□ -0.04
ACTN1-211ENST00000553882 SFT2D3Q587I9 215 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 THEMIS2Q5TEJ8 643 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 FOXB2Q5VYV0 432 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 SEL1L3Q68CR1 1132 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 NXNQ6DKJ4 435 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 ESRP1Q6NXG1 681 aaKnown RBP14.79□□□□□ -0.04
ACTN1-211ENST00000553882 SNX32Q86XE0 403 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 DQX1Q8TE96 717 aaKnown RBP14.79□□□□□ -0.04
ACTN1-211ENST00000553882 SGF29Q96ES7 293 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 TSNARE1Q96NA8 513 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 VAT1Q99536 393 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 TSC22D3Q99576 134 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 C1QTNF1Q9BXJ1 281 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 NDFIP2Q9NV92 336 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 SLC38A7Q9NVC3 462 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 XPR1Q9UBH6 696 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 MATN2O00339 956 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 MSI1O43347 362 aaKnown RBP14.79□□□□□ -0.04
ACTN1-211ENST00000553882 RNASEH1O60930 286 aaKnown RBP14.79□□□□□ -0.04
ACTN1-211ENST00000553882 PMPCBO75439 489 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 POMCP01189 267 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 TFEBP19484 476 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 BTKQ06187 659 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 PDCD2Q16342 344 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-211ENST00000553882 LIPMQ5VYY2 423 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 AAGABQ6PD74 315 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 CEP97Q8IW35 865 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 CENPLQ8N0S6 344 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-211ENST00000553882 TMEM86AQ8N2M4 240 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 ATPAF2Q8N5M1 289 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 CCNYL1Q8N7R7 359 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 DPF3Q92784 378 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 TMEM209Q96SK2 561 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 BRD8Q9H0E9 1235 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 AP5M1Q9H0R1 490 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 RHOJQ9H4E5 214 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 TMLHEQ9NVH6 421 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 CDH9Q9ULB4 789 aa14.79□□□□□ -0.04
ACTN1-211ENST00000553882 TMEM233B4DJY2 109 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 HDAC3O15379 428 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 B3GAT3O94766 335 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 GLDCP23378 1020 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 BRCC3P46736 316 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 RPL14P50914 215 aaKnown RBP14.78□□□□□ -0.04
ACTN1-211ENST00000553882 ATXN3P54252 364 aaPredicted RBP14.78□□□□□ -0.04
ACTN1-211ENST00000553882 AQP4P55087 323 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 TRIP10Q15642 601 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 INTS6LQ5JSJ4 861 aaKnown RBP14.78□□□□□ -0.04
ACTN1-211ENST00000553882 DCLRE1AQ6PJP8 1040 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 ZYG11AQ6WRX3 759 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 TMC7Q7Z402 723 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 MFSD6LQ8IWD5 586 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 RNF148Q8N7C7 305 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 PNPLA1Q8N8W4 532 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 GDPD5Q8WTR4 605 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 CATSPER2Q96P56 530 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 RTP3Q9BQQ7 232 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 FICDQ9BVA6 458 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 KIFC1Q9BW19 673 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 SFMBT1Q9UHJ3 866 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 MYADML2A6NDP7 307 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 PIK3R1P27986 724 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 PGFP49763 221 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 MTTPP55157 894 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 MAP2K5Q13163 448 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 FSCN1Q16658 493 aaKnown RBP14.78□□□□□ -0.04
ACTN1-211ENST00000553882 PM20D1Q6GTS8 502 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 NXNL1Q96CM4 212 aa14.78□□□□□ -0.04
ACTN1-211ENST00000553882 TBL1YQ9BQ87 522 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms