RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 DNAJB1P25685 340 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 PSMB4P28070 264 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 ATP5C1P36542 298 aaKnown RBP7.45□□□□□ -1.22
ATXN3-221ENST00000553498 GJA8P48165 433 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 SLC11A2P49281 568 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 NRLP54845 237 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 GEMP55040 296 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 CCL23P55773 120 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 GAD2Q05329 585 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 MGAT5Q09328 741 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 TAF10Q12962 218 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 LAMB3Q13751 1172 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 RAB33AQ14088 237 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 VEPH1Q14D04 833 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 SLC14A2Q15849 920 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 PDK4Q16654 411 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 C10orf120Q5SQS8 335 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 HP1BP3Q5SSJ5 553 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-221ENST00000553498 FAXCQ5TGI0 409 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 HHATQ5VTY9 493 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 DDX53Q86TM3 631 aaKnown RBP7.45□□□□□ -1.22
ATXN3-221ENST00000553498 TMEM135Q86UB9 458 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 LCA5Q86VQ0 697 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 NLRP8Q86W28 1048 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 IGDCC3Q8IVU1 814 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 ARHGAP12Q8IWW6 846 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF683Q8IZ20 524 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 PGBD3Q8N328 593 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 TMEM199Q8N511 208 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 NPWQ8N729 165 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 BANPQ8N9N5 519 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF461Q8TAF7 563 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 ZSCAN18Q8TBC5 510 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-221ENST00000553498 ATP2A3Q93084 1043 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 PLD4Q96BZ4 506 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 CFAP36Q96G28 342 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 TMEM169Q96HH4 297 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 SCLYQ96I15 445 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 APOPT1Q96IL0 206 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 SEC16BQ96JE7 1060 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF599Q96NL3 588 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 SEPT5Q99719 369 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-221ENST00000553498 IQCGQ9H095 443 aaKnown RBP7.45□□□□□ -1.22
ATXN3-221ENST00000553498 SIK2Q9H0K1 926 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 CWH43Q9H720 699 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 MRM3Q9HC36 420 aaKnown RBP7.45□□□□□ -1.22
ATXN3-221ENST00000553498 PRDM5Q9NQX1 630 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-221ENST00000553498 ENTPD7Q9NQZ7 604 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 TXNDC16Q9P2K2 825 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 SFMBT1Q9UHJ3 866 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 VANGL2Q9ULK5 521 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 MFHAS1Q9Y4C4 1052 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 CDY1Q9Y6F8 540 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 CITO14578 2027 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 PDCD11Q14690 1871 aaKnown RBP7.45□□□□□ -1.22
ATXN3-221ENST00000553498 A0A1W2PNR3 127 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 DFFAO00273 331 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 KLF11O14901 512 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 KIAA0355O15063 1070 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 TLR5O60602 858 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 LPXNO60711 386 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 BANF1O75531 89 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 C1RP00736 705 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 TIMP1P01033 207 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 JCHAINP01591 159 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 URODP06132 367 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 PFKLP17858 780 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 NFKB1P19838 968 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 CES1P23141 567 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 ETFBP38117 255 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 CCNFP41002 786 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 ALDH1A3P47895 512 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 POLD2P49005 469 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 HARS2P49590 506 aaKnown RBP7.44□□□□□ -1.22
ATXN3-221ENST00000553498 RABGGTBP53611 331 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 SEC13P55735 322 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 ARPP19P56211 112 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 IL10RBQ08334 325 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 EFEMP1Q12805 493 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 DUSP4Q13115 394 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 MPP3Q13368 585 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 MPP2Q14168 576 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 RFTN1Q14699 578 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-221ENST00000553498 CRYMQ14894 314 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 UGP2Q16851 508 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 INSCQ1MX18 579 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 PABPC1LQ4VXU2 614 aaKnown RBP7.44□□□□□ -1.22
ATXN3-221ENST00000553498 MS4A13Q5J8X5 152 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 RABGAP1LQ5R372 815 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 HECTD3Q5T447 861 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 GRTP1Q5TC63 336 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 CASC4Q6P4E1 433 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 C6orf89Q6UWU4 347 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 CAPN12Q6ZSI9 719 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 RTL10Q7L3V2 364 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 CTU1Q7Z7A3 348 aaKnown RBP7.44□□□□□ -1.22
ATXN3-221ENST00000553498 SRLQ86TD4 932 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 ITIH5Q86UX2 942 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 CHSY1Q86X52 802 aa7.44□□□□□ -1.22
ATXN3-221ENST00000553498 CTAGE3PQ8IX95 158 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms