RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 OR2T34Q8NGX1 318 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 TAS1R2Q8TE23 839 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 NDRG1Q92597 394 aaKnown RBP7.55□□□□□ -1.2
ATXN3-219ENST00000553488 UTP4Q969X6 686 aaKnown RBP7.55□□□□□ -1.2
ATXN3-219ENST00000553488 TTC17Q96AE7 1141 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 FAM131CQ96AQ9 280 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 WBP1Q96G27 269 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 HIC2Q96JB3 615 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 PRICKLE1Q96MT3 831 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-219ENST00000553488 ULBP1Q9BZM6 244 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 UBXN6Q9BZV1 441 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 ERVMER34-1Q9H9K5 563 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 GDF3Q9NR23 364 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 FBXL12Q9NXK8 326 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 SFMBT1Q9UHJ3 866 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 INTS6Q9UL03 887 aaKnown RBP7.55□□□□□ -1.2
ATXN3-219ENST00000553488 FZD4Q9ULV1 537 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 RNF112Q9ULX5 631 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 PLA2G4CQ9UP65 541 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 CLCA2Q9UQC9 943 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 HIF3AQ9Y2N7 669 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 HBS1LQ9Y450 684 aaKnown RBP7.55□□□□□ -1.2
ATXN3-219ENST00000553488 TRPM6Q9BX84 2022 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 NBASA2RRP1 2371 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 SCN8AQ9UQD0 1980 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 CAPN8A6NHC0 703 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 FAM47DPA6NHR8 397 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 SPTLC2O15270 562 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 PPP6R2O75170 966 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 KIF20AO95235 890 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 ZBED1O96006 694 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 ATP5BP06576 529 aaKnown RBP7.54□□□□□ -1.2
ATXN3-219ENST00000553488 TRIM49P0CI25 452 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 TRIM49CP0CI26 452 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 CKMT2P17540 419 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 TRIM21P19474 475 aaKnown RBP7.54□□□□□ -1.2
ATXN3-219ENST00000553488 GLDCP23378 1020 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 SLC6A4P31645 630 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 ARRB1P49407 418 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-219ENST00000553488 HARS2P49590 506 aaKnown RBP7.54□□□□□ -1.2
ATXN3-219ENST00000553488 TKTL1P51854 596 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 RHDQ02161 417 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 STK38Q15208 465 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 ZNF394Q53GI3 561 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 MPP7Q5T2T1 576 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 ADGRF1Q5T601 910 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 C9orf64Q5T6V5 341 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 PIK3R6Q5UE93 754 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 ARHGAP17Q68EM7 881 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 RFWD3Q6PCD5 774 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 GRAMD1CQ8IYS0 662 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 AADATQ8N5Z0 425 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 SNRNP27Q8WVK2 155 aaKnown RBP7.54□□□□□ -1.2
ATXN3-219ENST00000553488 TMA16Q96EY4 203 aaKnown RBP7.54□□□□□ -1.2
ATXN3-219ENST00000553488 MYEOVQ96EZ4 313 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 LGMNQ99538 433 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 NEUROG2Q9H2A3 272 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 CPNE5Q9HCH3 593 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 AASDHPPTQ9NRN7 309 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 OLA1Q9NTK5 396 aaKnown RBP7.54□□□□□ -1.2
ATXN3-219ENST00000553488 STOML1Q9UBI4 398 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 SUN2Q9UH99 717 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 NCKAP1Q9Y2A7 1128 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 PCDHB1Q9Y5F3 818 aa7.54□□□□□ -1.2
ATXN3-219ENST00000553488 LRRC72A6NJI9 287 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 YJEFN3A6XGL0 299 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 E7ENQ6 273 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 PYCARD-AS1I3L0S3 204 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 TLR4O00206 839 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 TRIM38O00635 465 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 PDXKO00764 312 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 XPO1O14980 1071 aaKnown RBP7.53□□□□□ -1.2
ATXN3-219ENST00000553488 MAPK13O15264 365 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 POLR2DO15514 142 aaKnown RBP7.53□□□□□ -1.2
ATXN3-219ENST00000553488 CUTAO60888 179 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 TBL1XO60907 577 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 GADD45BO75293 160 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-219ENST00000553488 RNASEH2AO75792 299 aaKnown RBP7.53□□□□□ -1.2
ATXN3-219ENST00000553488 YEATS4O95619 227 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 ECEL1O95672 775 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 SLFN14P0C7P3 912 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 POLR2EP19388 210 aaKnown RBP7.53□□□□□ -1.2
ATXN3-219ENST00000553488 DRD3P35462 400 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 CSKP41240 450 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 GCLMP48507 274 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 PSMD8P48556 350 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 VAMP7P51809 220 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 METAP1P53582 386 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 RAD23BP54727 409 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 TMPRSS3P57727 454 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 ADIGQ0VDE8 80 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 ARTNQ5T4W7 220 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 CDCP2Q5VXM1 449 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 NADSYN1Q6IA69 706 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 NAPEPLDQ6IQ20 393 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 MSANTD2Q6P1R3 559 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 MMAAQ8IVH4 418 aaKnown RBP7.53□□□□□ -1.2
ATXN3-219ENST00000553488 MFN1Q8IWA4 741 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 DHX40Q8IX18 779 aaKnown RBP7.53□□□□□ -1.2
ATXN3-219ENST00000553488 SCML4Q8N228 414 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms