RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ATPAF2Q8N5M1 289 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 GPATCH11Q8N954 259 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 FATE1Q969F0 183 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 MIEF2Q96C03 454 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 MFSD3Q96ES6 412 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 IL12RB2Q99665 862 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 MRGBPQ9NV56 204 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 TLK1Q9UKI8 766 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 OGDHLQ9ULD0 1010 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 TIMM13Q9Y5L4 95 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-205ENST00000553474 CASTOR2A6NHX0 329 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 G3V2L1 256 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 MATN3O15232 486 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 ATP9BO43861 1147 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 KIF1CO43896 1103 aaKnown RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 USP12O75317 370 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 CABYRO75952 493 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 PAMP19021 973 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 BDNFP23560 247 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 CPOXP36551 454 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 KPNA2P52292 529 aaKnown RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 MXRA7P84157 204 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 SLC12A1Q13621 1099 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 THOC5Q13769 683 aaKnown RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 ITGA9Q13797 1035 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 CFAP157Q5JU67 520 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 CERCAMQ5T4B2 595 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 ACBD5Q5T8D3 534 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 OVOS1Q6IE37 1185 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 GDF6Q6KF10 455 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 PKN3Q6P5Z2 889 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 EPGNQ6UW88 154 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 CES3Q6UWW8 571 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 LRRC74BQ6ZQY2 392 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 CMC1Q7Z7K0 106 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 WDR60Q8WVS4 1066 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 EDEM1Q92611 657 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 JADE3Q92613 823 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 SUSD3Q96L08 255 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 TBL1YQ9BQ87 522 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 PRKD2Q9BZL6 878 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 UBE2OQ9C0C9 1292 aaKnown RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 CDH19Q9H159 772 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 CHRAC1Q9NRG0 131 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 OXSMQ9NWU1 459 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 NEU3Q9UQ49 428 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 LRCH1Q9Y2L9 728 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 A0A1W2PQ45 241 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 A0A1W2PQY0 241 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 MOXD2PA6NHM9 499 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 WASH4PA8MWX3 477 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 TBX10O75333 385 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 LYPLA1O75608 230 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 HSPA4LO95757 839 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 AMHP03971 560 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 SERPINB5P36952 375 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 GJA8P48165 433 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 NUMBP49757 651 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 DSC3Q14574 896 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 TMCO4Q5TGY1 634 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 BTBD8Q5XKL5 378 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 CCSAPQ6IQ19 270 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 ZYG11AQ6WRX3 759 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 ZC3HC1Q86WB0 502 aaKnown RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 KCNV2Q8TDN2 545 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 DIS3LQ8TF46 1054 aaKnown RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 PDCD6IPQ8WUM4 868 aaKnown RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 RSPH1Q8WYR4 309 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 C1orf74Q96LT6 269 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 GLT1D1Q96MS3 346 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 AGAP2Q99490 1192 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 ILKAPQ9H0C8 392 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 STARD7Q9NQZ5 370 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 NMRK1Q9NWW6 199 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 VTI1BQ9UEU0 232 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 SLC7A8Q9UHI5 535 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 CORO1CQ9ULV4 474 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-205ENST00000553474 RAP2CQ9Y3L5 183 aa13.12□□□□□ -0.31
SHMT2-205ENST00000553474 CCNT2O60583 730 aaKnown RBP13.11□□□□□ -0.31
SHMT2-205ENST00000553474 KRT36O76013 467 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 SLC2A3P11169 496 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 CRABP2P29373 138 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 BTKQ06187 659 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 UBAP2LQ14157 1087 aaKnown RBP13.11□□□□□ -0.31
SHMT2-205ENST00000553474 LIPMQ5VYY2 423 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 KIAA0408Q6ZU52 694 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 SETD3Q86TU7 594 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-205ENST00000553474 MYLK4Q86YV6 388 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-205ENST00000553474 CNTD1Q8N815 330 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 NETO2Q8NC67 525 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 PPHLN1Q8NEY8 458 aaKnown RBP13.11□□□□□ -0.31
SHMT2-205ENST00000553474 ACTRT2Q8TDY3 377 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 LPPQ93052 612 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 CNDP1Q96KN2 507 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 SERPINB11Q96P15 392 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 THTPAQ9BU02 230 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 DRC3Q9H069 523 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 CRISPLD2Q9H0B8 497 aa13.11□□□□□ -0.31
SHMT2-205ENST00000553474 GLOD4Q9HC38 313 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms