RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 ZNF419Q96HQ0 510 aaPredicted RBP9.31□□□□□ -0.92
CCDC59-207ENST00000552606 RBM41Q96IZ5 413 aaKnown RBP9.31□□□□□ -0.92
CCDC59-207ENST00000552606 MRGPRX1Q96LB2 322 aa9.31□□□□□ -0.92
CCDC59-207ENST00000552606 OLFM3Q96PB7 478 aa9.31□□□□□ -0.92
CCDC59-207ENST00000552606 SPON2Q9BUD6 331 aa9.31□□□□□ -0.92
CCDC59-207ENST00000552606 CEP44Q9C0F1 390 aa9.31□□□□□ -0.92
CCDC59-207ENST00000552606 MKRN2Q9H000 416 aaKnown RBP9.31□□□□□ -0.92
CCDC59-207ENST00000552606 SLC6A17Q9H1V8 727 aa9.31□□□□□ -0.92
CCDC59-207ENST00000552606 FBRSQ9HAH7 460 aa9.31□□□□□ -0.92
CCDC59-207ENST00000552606 DTLQ9NZJ0 730 aa9.31□□□□□ -0.92
CCDC59-207ENST00000552606 SLC8A2Q9UPR5 921 aa9.31□□□□□ -0.92
CCDC59-207ENST00000552606 ZNF106Q9H2Y7 1883 aaKnown RBP9.31□□□□□ -0.92
CCDC59-207ENST00000552606 VPS13AQ96RL7 3174 aa9.31□□□□□ -0.92
CCDC59-207ENST00000552606 MYO15AQ9UKN7 3530 aa9.31□□□□□ -0.92
CCDC59-207ENST00000552606 TARSL2A2RTX5 802 aaKnown RBP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 ARHGAP42A6NI28 874 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 J3KR12 359 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 DFFAO00273 331 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 MAFKO60675 156 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 LILRB5O75023 590 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 TMCC1O94876 653 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 KRT10P13645 584 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 MSNP26038 577 aaKnown RBP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 GARSP41250 739 aaKnown RBP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 RWDD2BP57060 319 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 GEMIN4P57678 1058 aaKnown RBP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 ST8SIA6P61647 398 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 CSTF1Q05048 431 aaKnown RBP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 IL10RBQ08334 325 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 SLC20A2Q08357 652 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 SLC10A2Q12908 348 aaPredicted RBP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 ELAVL3Q14576 367 aaKnown RBP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 DLG2Q15700 870 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 TFDP3Q5H9I0 405 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 ZFYVE27Q5T4F4 411 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 MEI1Q5TIA1 1274 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 SDE2Q6IQ49 451 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 ANO7Q6IWH7 933 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 RETSATQ6NUM9 610 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 WDR5BQ86VZ2 330 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 ATP11CQ8NB49 1132 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 OR2A12Q8NGT7 310 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 OR2T3Q8NH03 318 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 HMGB4Q8WW32 186 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 CASKIN2Q8WXE0 1202 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 ISG20Q96AZ6 181 aaKnown RBP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 HDAC11Q96DB2 347 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 ALS2CR12Q96Q35 445 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 FAM126AQ9BYI3 521 aaPredicted RBP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 RSPH9Q9H1X1 276 aaPredicted RBP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 PRDM16Q9HAZ2 1276 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 POLMQ9NP87 494 aaPredicted RBP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 CD93Q9NPY3 652 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 USP36Q9P275 1121 aaKnown RBP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 LHX3Q9UBR4 397 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 AMFRQ9UKV5 643 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 FCF1Q9Y324 198 aaKnown RBP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.3□□□□□ -0.92
CCDC59-207ENST00000552606 TMEM131Q92545 1883 aa9.3□□□□□ -0.92
CCDC59-207ENST00000552606 H0Y858 1186 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 RNF103O00237 685 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 ARHGAP33O14559 1287 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 RIOK3O14730 519 aaKnown RBP9.29□□□□□ -0.92
CCDC59-207ENST00000552606 APOL1O14791 398 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 ALOX15BO15296 676 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 SYNCRIPO60506 623 aaKnown RBP9.29□□□□□ -0.92
CCDC59-207ENST00000552606 ZRANB2O95218 330 aaKnown RBP eCLIP9.29□□□□□ -0.924e-7■■■■■ 32.1
CCDC59-207ENST00000552606 MAP3K6O95382 1288 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 GSRP00390 522 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 IGLV3-19P01714 112 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 CTSLP07711 333 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 PYGMP11217 842 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 PECAM1P16284 738 aaPredicted RBP9.29□□□□□ -0.92
CCDC59-207ENST00000552606 PXNP49023 591 aaPredicted RBP9.29□□□□□ -0.92
CCDC59-207ENST00000552606 FNTBP49356 437 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 COPS2P61201 443 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 INO80DQ53TQ3 878 aaPredicted RBP9.29□□□□□ -0.92
CCDC59-207ENST00000552606 AADACL2Q6P093 401 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 NPNTQ6UXI9 565 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 LEKR1Q6ZMV7 388 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 BBS12Q6ZW61 710 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 LONP2Q86WA8 852 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 RFX6Q8HWS3 928 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 RCOR2Q8IZ40 523 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 STK40Q8N2I9 435 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 ATPAF2Q8N5M1 289 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 PCDH20Q8N6Y1 951 aaKnown RBP9.29□□□□□ -0.92
CCDC59-207ENST00000552606 TRIM58Q8NG06 486 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 FATE1Q969F0 183 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 FAM131CQ96AQ9 280 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 FAM129BQ96TA1 746 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 TLR10Q9BXR5 811 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 TPSD1Q9BZJ3 242 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 TNKS2Q9H2K2 1166 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 SP110Q9HB58 689 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 ZSCAN32Q9NX65 697 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 UBA2Q9UBT2 640 aaPredicted RBP9.29□□□□□ -0.92
CCDC59-207ENST00000552606 SUN2Q9UH99 717 aa9.29□□□□□ -0.92
CCDC59-207ENST00000552606 IPO11Q9UI26 975 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms