RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TMCO3Q6UWJ1 677 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 POLNQ7Z5Q5 900 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 RGL4Q8IZJ4 473 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 RYBPQ8N488 228 aaPredicted RBP18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 HDDC3Q8N4P3 179 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 LZTR1Q8N653 840 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 CASKIN2Q8WXE0 1202 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 CSPG4P5Q96PW8 444 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 BAG1Q99933 345 aaPredicted RBP18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 TM6SF2Q9BZW4 377 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 DYRK4Q9NR20 520 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 RCOR3Q9P2K3 495 aaPredicted RBP18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 NUP205Q92621 2012 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 VPS13AQ96RL7 3174 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 CEP192Q8TEP8 1941 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 ATXN2Q99700 1313 aaKnown RBP18.83■□□□□ 0.61
PRPF40B-216ENST00000552301 DFFAO00273 331 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 PRNPP04156 253 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 CHRNA3P32297 505 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 SERPINB6P35237 376 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 LMNB2Q03252 620 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 SERINC3Q13530 473 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 LEKR1Q6ZMV7 388 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 SYT12Q8IV01 421 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 MAP7D3Q8IWC1 876 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 KCTD6Q8NC69 237 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 CADM4Q8NFZ8 388 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 OR2A12Q8NGT7 310 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 PIP4K2CQ8TBX8 421 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 GRIN3AQ8TCU5 1115 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 SNX19Q92543 992 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 ISG20Q96AZ6 181 aaKnown RBP18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 CALN1Q9BXU9 219 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 PCED1AQ9H1Q7 454 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 LRRC19Q9H756 370 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 SP110Q9HB58 689 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 PARD6AQ9NPB6 346 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 UBA2Q9UBT2 640 aaPredicted RBP18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 FZD4Q9ULV1 537 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 ACTL7AQ9Y615 435 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 NUMA1Q14980 2115 aa18.83■□□□□ 0.6
PRPF40B-216ENST00000552301 FAM47DPA6NHR8 397 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 LRRC72A6NJI9 287 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 KPNA3O00505 521 aaPredicted RBP18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 SPOPO43791 374 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 TMCC1O94876 653 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 AMPD1P23109 780 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 ITPKAP23677 461 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 ACSL1P33121 698 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 TAS2R40P59535 323 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 SNRPD1P62314 119 aaKnown RBP18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 CCDC15Q0P6D6 951 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 PDK2Q15119 407 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 POM121L1PQ3SYA9 428 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 ODF2Q5BJF6 829 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 CARD16Q5EG05 197 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 DPY19L3Q6ZPD9 716 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 PRR23CQ6ZRP0 262 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 RABEPKQ7Z6M1 372 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 CPNE8Q86YQ8 564 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 SLC41A1Q8IVJ1 513 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 ZNF419Q96HQ0 510 aaPredicted RBP18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 PPP1R16AQ96I34 528 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 SLC39A8Q9C0K1 460 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 KLHL11Q9NVR0 708 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 IL36AQ9UHA7 158 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 PPM1HQ9ULR3 514 aa18.82■□□□□ 0.6
PRPF40B-216ENST00000552301 GSRP00390 522 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 ZNF806P0C7X5 589 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 HOXD12P35452 270 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 SLC1A1P43005 524 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 PAPOLAP51003 745 aaKnown RBP18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 CCNHP51946 323 aaPredicted RBP18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 GSDMDP57764 484 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 RHOAP61586 193 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 TCEAL1Q15170 157 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 AASDHQ4L235 1098 aaPredicted RBP18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 INO80DQ53TQ3 878 aaPredicted RBP18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 PLA2G2CQ5R387 149 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 KIAA1328Q86T90 577 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 AADATQ8N5Z0 425 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 NPWQ8N729 165 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 CHST14Q8NCH0 376 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 TMIEQ8NEW7 156 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 GDAP1L1Q96MZ0 367 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 HEPHQ9BQS7 1158 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 ZNF670Q9BS34 389 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 KLC2Q9H0B6 622 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 NEUROG2Q9H2A3 272 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 SMOC1Q9H4F8 434 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 ZDHHC6Q9H6R6 413 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 HECAQ9UBI9 543 aaPredicted RBP18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 SERGEFQ9UGK8 458 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 SUSD2Q9UGT4 822 aa18.81■□□□□ 0.6
PRPF40B-216ENST00000552301 KHNYNO15037 678 aaKnown RBP18.8■□□□□ 0.6
PRPF40B-216ENST00000552301 PRAMEF11O60813 436 aa18.8■□□□□ 0.6
PRPF40B-216ENST00000552301 CD160O95971 181 aa18.8■□□□□ 0.6
PRPF40B-216ENST00000552301 IGSF6O95976 241 aa18.8■□□□□ 0.6
PRPF40B-216ENST00000552301 CFIP05156 583 aa18.8■□□□□ 0.6
PRPF40B-216ENST00000552301 TNNT1P13805 278 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms