RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 JUPP14923 745 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 CPA1P15085 419 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 TGM1P22735 817 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 CHMP24386 653 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 SLC5A2P31639 672 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 TUBP50607 506 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 CLCN5P51795 746 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 LOXL3P58215 753 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 LILRA4P59901 499 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 RAC3P60763 192 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 TIMM10P62072 90 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 CNTN2Q02246 1040 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 DUSP8Q13202 625 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 FOXE3Q13461 319 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 RNF151Q2KHN1 245 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 FAM214AQ32MH5 1076 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 CTXN3Q4LDR2 81 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 HS1BP3Q53T59 392 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 N4BP2L1Q5TBK1 243 aaPredicted RBP4.09□□□□□ -1.75
LIMA1-208ENST00000551691 ICE2Q659A1 982 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 TAPT1Q6NXT6 567 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 FOXR2Q6PJQ5 311 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 MAMDC4Q6UXC1 1216 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 SYNE3Q6ZMZ3 975 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 RNF207Q6ZRF8 634 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 KIAA0408Q6ZU52 694 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 MED25Q71SY5 747 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 CHD1LQ86WJ1 897 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 GAS2L3Q86XJ1 694 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 CPOQ8IVL8 374 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 MYOCDQ8IZQ8 938 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 FSTL5Q8N475 847 aaPredicted RBP4.09□□□□□ -1.75
LIMA1-208ENST00000551691 SMRP1Q8NCR6 262 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 SIMC1Q8NDZ2 872 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 BPIFB1Q8TDL5 484 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 CENPIQ92674 756 aaPredicted RBP4.09□□□□□ -1.75
LIMA1-208ENST00000551691 RSC1A1Q92681 617 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 PPP2R3CQ969Q6 453 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 AJUBAQ96IF1 538 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 C7orf26Q96N11 449 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 KLHL32Q96NJ5 620 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 TRIB1Q96RU8 372 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 HNRNPABQ99729 332 aaKnown RBP4.09□□□□□ -1.75
LIMA1-208ENST00000551691 DPYSL5Q9BPU6 564 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 TTPALQ9BTX7 342 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 PAIP1Q9H074 479 aaKnown RBP4.09□□□□□ -1.75
LIMA1-208ENST00000551691 CCDC68Q9H2F9 335 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 PNNQ9H307 717 aaKnown RBP4.09□□□□□ -1.75
LIMA1-208ENST00000551691 MFSD1Q9H3U5 465 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 BICC1Q9H694 974 aaKnown RBP4.09□□□□□ -1.75
LIMA1-208ENST00000551691 ACAD9Q9H845 621 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 HAUS2Q9NVX0 235 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 NSMCE4AQ9NXX6 385 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 DNAJB11Q9UBS4 358 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 LPAR3Q9UBY5 353 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 ANGPTL2Q9UKU9 493 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 AGAP1Q9UPQ3 857 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 USP22Q9UPT9 525 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 TESMINQ9Y4I5 508 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 DTNAQ9Y4J8 743 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 INSL6Q9Y581 213 aa4.09□□□□□ -1.75
LIMA1-208ENST00000551691 SIPA1L1O43166 1804 aa4.09□□□□□ -1.76
LIMA1-208ENST00000551691 RALGAPA2Q2PPJ7 1873 aa4.09□□□□□ -1.76
LIMA1-208ENST00000551691 IGSF10Q6WRI0 2623 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 A0A087WZ62 844 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 PGPEP1LA6NFU8 196 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 PRSS29PA6NIE9 313 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 SRRM3A6NNA2 597 aaPredicted RBP4.08□□□□□ -1.76
LIMA1-208ENST00000551691 AP3D1O14617 1153 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 HOXA3O43365 443 aaPredicted RBP4.08□□□□□ -1.76
LIMA1-208ENST00000551691 ANP32CO43423 234 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 MCM3APO60318 1980 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 GUCY1B2O75343 617 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 CABYRO75952 493 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 IPO13O94829 963 aaKnown RBP4.08□□□□□ -1.76
LIMA1-208ENST00000551691 ANXA6P08133 673 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 SUPT20HL2P0C7V6 817 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 SP9P0CG40 484 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 IGF2RP11717 2491 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 CKBP12277 381 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 HK1P19367 917 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 RRM1P23921 792 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 SLC6A4P31645 630 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 RFC2P35250 354 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 ARL3P36405 182 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 NRIP1P48552 1158 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 POLD2P49005 469 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 CCR9P51686 369 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 DRG2P55039 364 aaKnown RBP4.08□□□□□ -1.76
LIMA1-208ENST00000551691 DYNLL1P63167 89 aaKnown RBP4.08□□□□□ -1.76
LIMA1-208ENST00000551691 RPP30P78346 268 aaKnown RBP4.08□□□□□ -1.76
LIMA1-208ENST00000551691 CALD1Q05682 793 aaKnown RBP4.08□□□□□ -1.76
LIMA1-208ENST00000551691 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.08□□□□□ -1.76
LIMA1-208ENST00000551691 GOLGA8FQ08AF8 430 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 RIN1Q13671 783 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 ATP1A4Q13733 1029 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 BMT2Q1RMZ1 405 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 ATG2AQ2TAZ0 1938 aa4.08□□□□□ -1.76
LIMA1-208ENST00000551691 CERKLQ49MI3 558 aaPredicted RBP4.08□□□□□ -1.76
LIMA1-208ENST00000551691 SPECC1Q5M775 1068 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms