RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 ATP5OP48047 213 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 SLC6A11P48066 632 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 NR2C2P49116 596 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 YWHAGP61981 247 aaKnown RBP eCLIP7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 GBE1Q04446 702 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 ZNF844Q08AG5 666 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 IFRD2Q12894 506 aaPredicted RBP7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 SEMA3BQ13214 749 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 XRCC4Q13426 336 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 DPYSQ14117 519 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 DMC1Q14565 340 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 MORF4L2Q15014 288 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 PDGFRLQ15198 375 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 TAF12Q16514 161 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 ARL13BQ3SXY8 428 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 CEP85LQ5SZL2 805 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 RNASEH2BQ5TBB1 312 aaKnown RBP7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 STPG1Q5TH74 334 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 DENND2CQ68D51 928 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 NCBP2-AS2Q69YL0 99 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 TMEM92Q6UXU6 159 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 CEP128Q6ZU80 1094 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 TRMT10CQ7L0Y3 403 aaKnown RBP7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 SYT13Q7L8C5 426 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 SCD5Q86SK9 330 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 ZC3H18Q86VM9 953 aaKnown RBP7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 CCDC25Q86WR0 208 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 CDKL3Q8IVW4 592 aaPredicted RBP7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 NUP93Q8N1F7 819 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 ZCCHC9Q8N567 271 aaKnown RBP7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 GOLGA6L1Q8N7Z2 621 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 FAM71DQ8N9W8 422 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 USP33Q8TEY7 942 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 ARL8AQ96BM9 186 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 RTP4Q96DX8 246 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 TPSD1Q9BZJ3 242 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 USP29Q9HBJ7 922 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 ANLNQ9NQW6 1124 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 ARHGEF4Q9NR80 690 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 ABCC13Q9NSE7 274 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 THG1LQ9NWX6 298 aaKnown RBP7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 DUS2Q9NX74 493 aaKnown RBP7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 IL37Q9NZH6 218 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 VPS18Q9P253 973 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 RALYQ9UKM9 306 aaKnown RBP7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 ARHGAP26Q9UNA1 814 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 SCML2Q9UQR0 700 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 HEY1Q9Y5J3 304 aa7.58□□□□□ -1.2
SMARCD1-210ENST00000551352 PKD1L2Q7Z442 2459 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 NUMA1Q14980 2115 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 TRAV19A0A0A6YYK7 116 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 A0A1W2PQH9 124 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 FAM92AA1XBS5 289 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 EEF2KO00418 725 aaKnown RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 KCNN4O15554 427 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 IRAK2O43187 625 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 RIPK2O43353 540 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 CREB3O43889 395 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 MFSD11O43934 449 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 MAP3K6O95382 1288 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 TOP3BO95985 862 aaKnown RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 CKMP06732 381 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 DRD1P21728 446 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 SDHBP21912 280 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 HCAR3P49019 387 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 ZNF135P52742 658 aaPredicted RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 SEC13P55735 322 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 EIF3BP55884 814 aaKnown RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 RPL10AP62906 217 aaKnown RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 GABPB1Q06547 395 aaPredicted RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 GRSF1Q12849 480 aaKnown RBP eCLIP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 SLC10A2Q12908 348 aaPredicted RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 EIF4EBP2Q13542 120 aaPredicted RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 PAFAH1B3Q15102 231 aaKnown RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 AASDHQ4L235 1098 aaPredicted RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 SLC45A4Q5BKX6 768 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 TTMPQ5BVD1 217 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 UBAP2Q5T6F2 1119 aaKnown RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 EMC10Q5UCC4 262 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 BTBD8Q5XKL5 378 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 PMS2CLQ68D20 193 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 MSANTD2Q6P1R3 559 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 RFX8Q6ZV50 586 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 B4GALNT4Q76KP1 1039 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 PCGF5Q86SE9 256 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 HOOK3Q86VS8 718 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 RASSF3Q86WH2 238 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 RELL1Q8IUW5 271 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 PPIL6Q8IXY8 311 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 ARHGAP18Q8N392 663 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 CPA6Q8N4T0 437 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 TTC16Q8NEE8 873 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 MDGA1Q8NFP4 955 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 OR2W6PQ8NHA6 318 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 CPT1BQ92523 772 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 PRCCQ92733 491 aaPredicted RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 LOXL4Q96JB6 756 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 SPATA17Q96L03 361 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 PWWP2AQ96N64 755 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 OLFM3Q96PB7 478 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms