RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 PRKCGP05129 697 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 MMP2P08253 660 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 ATP5C1P36542 298 aaKnown RBP11.69□□□□□ -0.54
RAB5C-208ENST00000551338 ACVRL1P37023 503 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 CHRNA4P43681 627 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 YBEYP58557 167 aaPredicted RBP11.69□□□□□ -0.54
RAB5C-208ENST00000551338 DSC2Q02487 901 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 IL10RBQ08334 325 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 MTA1Q13330 715 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 PLD1Q13393 1074 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 PDE1CQ14123 709 aaPredicted RBP11.69□□□□□ -0.54
RAB5C-208ENST00000551338 IHHQ14623 411 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 LRRC26Q2I0M4 334 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 FAM133BQ5BKY9 247 aaKnown RBP11.69□□□□□ -0.54
RAB5C-208ENST00000551338 SPOUT1Q5T280 376 aaKnown RBP11.69□□□□□ -0.54
RAB5C-208ENST00000551338 CES4AQ5XG92 561 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 TPGS2Q68CL5 300 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 KIAA1841Q6NSI8 718 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 FAM117BQ6P1L5 589 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 PKN3Q6P5Z2 889 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 STRA8Q7Z7C7 330 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 CMTR2Q8IYT2 770 aaKnown RBP11.69□□□□□ -0.54
RAB5C-208ENST00000551338 LGI2Q8N0V4 545 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 CNPY4Q8N129 248 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 MICALL1Q8N3F8 863 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 PGBD5Q8N414 524 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 DCLK2Q8N568 766 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 PSMG2Q969U7 264 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 AZIN2Q96A70 460 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 TADA1Q96BN2 335 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 IMP4Q96G21 291 aaKnown RBP11.69□□□□□ -0.54
RAB5C-208ENST00000551338 CDK5RAP1Q96SZ6 601 aaKnown RBP11.69□□□□□ -0.54
RAB5C-208ENST00000551338 AGAP2Q99490 1192 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 BEGAINQ9BUH8 593 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 TSSK1BQ9BXA7 367 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 PDFQ9HBH1 243 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 ENTPD7Q9NQZ7 604 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 IARS2Q9NSE4 1012 aaKnown RBP11.69□□□□□ -0.54
RAB5C-208ENST00000551338 C20orf96Q9NUD7 363 aaPredicted RBP11.69□□□□□ -0.54
RAB5C-208ENST00000551338 DONSONQ9NYP3 566 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 SIRPGQ9P1W8 387 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 DNMT3LQ9UJW3 386 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 USH1CQ9Y6N9 552 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 CCDC78A2IDD5 438 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 ZNF840PA6NDX5 716 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 COCHO43405 550 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 PLIN3O60664 434 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 RAMP2O60895 175 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 NEBLO76041 1014 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 BPGMP07738 259 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 LAG3P18627 525 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 ITGB8P26012 769 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 HOXD9P28356 352 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-208ENST00000551338 SPRP35270 261 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-208ENST00000551338 GMPRP36959 345 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 ABCG1P45844 678 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 SERPINB8P50452 374 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 CSRP3P50461 194 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 WNT3AP56704 352 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 MAXP61244 160 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 NCALDP61601 193 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 WDR5P61964 334 aaKnown RBP11.68□□□□□ -0.54
RAB5C-208ENST00000551338 CCDC15Q0P6D6 951 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 SERINC3Q13530 473 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 POU6F1Q14863 301 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 POLD3Q15054 466 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-208ENST00000551338 DBN1Q16643 649 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 PARP15Q460N3 678 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 HSP90AA5PQ58FG0 334 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 HECTD3Q5T447 861 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 STXBP5Q5T5C0 1151 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 N4BP2L1Q5TBK1 243 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-208ENST00000551338 MARC1Q5VT66 337 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 PDPK2PQ6A1A2 396 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 C16orf46Q6P387 395 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 KLHDC10Q6PID8 442 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 POTEHQ6S545 545 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 RANBP10Q6VN20 620 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 KYAT3Q6YP21 454 aaKnown RBP11.68□□□□□ -0.54
RAB5C-208ENST00000551338 CMC1Q7Z7K0 106 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 TRIM42Q8IWZ5 723 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 FITM2Q8N6M3 262 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 PPHLN1Q8NEY8 458 aaKnown RBP11.68□□□□□ -0.54
RAB5C-208ENST00000551338 RFWD2Q8NHY2 731 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 ZNF461Q8TAF7 563 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 ARRDC2Q8TBH0 407 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 ZNF398Q8TD17 642 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 PTCD2Q8WV60 388 aaKnown RBP11.68□□□□□ -0.54
RAB5C-208ENST00000551338 PPM1EQ8WY54 764 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 WBP2Q969T9 261 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 PLD4Q96BZ4 506 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 PABPC5Q96DU9 382 aaKnown RBP11.68□□□□□ -0.54
RAB5C-208ENST00000551338 TRMT2BQ96GJ1 504 aaKnown RBP11.68□□□□□ -0.54
RAB5C-208ENST00000551338 TMEM169Q96HH4 297 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 MYRFLQ96LU7 910 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 ZNF512Q96ME7 567 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-208ENST00000551338 PRICKLE1Q96MT3 831 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-208ENST00000551338 RASSF4Q9H2L5 321 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 RXFP1Q9HBX9 757 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 ARNT2Q9HBZ2 717 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms