RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 TMEM135Q86UB9 458 aa13.8□□□□□ -0.2
SNRPF-203ENST00000551316 CIR1Q86X95 450 aaPredicted RBP13.8□□□□□ -0.2
SNRPF-203ENST00000551316 HEXIM2Q96MH2 286 aaKnown RBP13.8□□□□□ -0.2
SNRPF-203ENST00000551316 CMKLR1Q99788 373 aa13.8□□□□□ -0.2
SNRPF-203ENST00000551316 CDH19Q9H159 772 aa13.8□□□□□ -0.2
SNRPF-203ENST00000551316 RDH14Q9HBH5 336 aa13.8□□□□□ -0.2
SNRPF-203ENST00000551316 SPASTQ9UBP0 616 aa13.8□□□□□ -0.2
SNRPF-203ENST00000551316 XPO7Q9UIA9 1087 aaKnown RBP13.8□□□□□ -0.2
SNRPF-203ENST00000551316 RIOK3O14730 519 aaKnown RBP13.79□□□□□ -0.2
SNRPF-203ENST00000551316 HNRNPRO43390 633 aaKnown RBP13.79□□□□□ -0.2
SNRPF-203ENST00000551316 BNIP3LO60238 219 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 ACSL4O60488 711 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 PCDH8O95206 1070 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 PAK4O96013 591 aaPredicted RBP13.79□□□□□ -0.2
SNRPF-203ENST00000551316 SLFN14P0C7P3 912 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 CYP2J2P51589 502 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 PFN3P60673 137 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 NCOA4Q13772 614 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 RNF219Q5W0B1 726 aaPredicted RBP13.79□□□□□ -0.2
SNRPF-203ENST00000551316 ESRP1Q6NXG1 681 aaKnown RBP13.79□□□□□ -0.2
SNRPF-203ENST00000551316 C16orf46Q6P387 395 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 SPRED1Q7Z699 444 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 PIGZQ86VD9 579 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 CCDC13Q8IYE1 715 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 OR52K2Q8NGK3 314 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 STARD8Q92502 1023 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 GLMNQ92990 594 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 RNF31Q96EP0 1072 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 DUSP16Q9BY84 665 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 GGT7Q9UJ14 662 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 HS3ST3A1Q9Y663 406 aa13.79□□□□□ -0.2
SNRPF-203ENST00000551316 FRMD3A2A2Y4 597 aa13.78□□□□□ -0.2
SNRPF-203ENST00000551316 YJEFN3A6XGL0 299 aa13.78□□□□□ -0.2
SNRPF-203ENST00000551316 E7ENQ6 273 aa13.78□□□□□ -0.2
SNRPF-203ENST00000551316 C1QTNF3-AMACRE9PGA6 284 aa13.78□□□□□ -0.2
SNRPF-203ENST00000551316 TGFB1I1O43294 461 aa13.78□□□□□ -0.2
SNRPF-203ENST00000551316 DNAJB5O75953 348 aa13.78□□□□□ -0.2
SNRPF-203ENST00000551316 PDGFRAP16234 1089 aa13.78□□□□□ -0.2
SNRPF-203ENST00000551316 UBA7P41226 1012 aa13.78□□□□□ -0.2
SNRPF-203ENST00000551316 RABIFP47224 123 aa13.78□□□□□ -0.2
SNRPF-203ENST00000551316 BIRC3Q13489 604 aa13.78□□□□□ -0.2
SNRPF-203ENST00000551316 DCAF6Q58WW2 860 aa13.78□□□□□ -0.2
SNRPF-203ENST00000551316 DCP2Q8IU60 420 aaKnown RBP13.78□□□□□ -0.2
SNRPF-203ENST00000551316 GPBAR1Q8TDU6 330 aa13.78□□□□□ -0.2
SNRPF-203ENST00000551316 LRRIQ3A6PVS8 624 aaPredicted RBP13.77□□□□□ -0.21
SNRPF-203ENST00000551316 KPNA3O00505 521 aaPredicted RBP13.77□□□□□ -0.21
SNRPF-203ENST00000551316 MCF2LO15068 1137 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 CLIC2O15247 247 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 GAP43P17677 238 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 F8A1P23610 371 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 IGFALSP35858 605 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 TKTL1P51854 596 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 INCA1Q0VD86 236 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 FAM46CQ5VWP2 391 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 NEK5Q6P3R8 708 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 UNC93AQ86WB7 457 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 Q8NA96 180 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 CHST14Q8NCH0 376 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 ART4Q93070 314 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 TMEM159Q96B96 161 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 LURAP1Q96LR2 239 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 NUDT22Q9BRQ3 303 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 SLC17A9Q9BYT1 436 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 GPN2Q9H9Y4 310 aaPredicted RBP13.77□□□□□ -0.21
SNRPF-203ENST00000551316 IPO11Q9UI26 975 aaKnown RBP13.77□□□□□ -0.21
SNRPF-203ENST00000551316 TLK1Q9UKI8 766 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 PCDHGA3Q9Y5H0 932 aa13.77□□□□□ -0.21
SNRPF-203ENST00000551316 KIAA0391O15091 583 aaKnown RBP13.76□□□□□ -0.21
SNRPF-203ENST00000551316 PHACTR2O75167 634 aa13.76□□□□□ -0.21
SNRPF-203ENST00000551316 C4BPAP04003 597 aaKnown RBP13.76□□□□□ -0.21
SNRPF-203ENST00000551316 IDEP14735 1019 aa13.76□□□□□ -0.21
SNRPF-203ENST00000551316 NAA30Q147X3 362 aaPredicted RBP13.76□□□□□ -0.21
SNRPF-203ENST00000551316 ANKRD1Q15327 319 aa13.76□□□□□ -0.21
SNRPF-203ENST00000551316 INPP5JQ15735 1006 aaPredicted RBP13.76□□□□□ -0.21
SNRPF-203ENST00000551316 KMT5BQ4FZB7 885 aa13.76□□□□□ -0.21
SNRPF-203ENST00000551316 MS4A13Q5J8X5 152 aa13.76□□□□□ -0.21
SNRPF-203ENST00000551316 PM20D1Q6GTS8 502 aa13.76□□□□□ -0.21
SNRPF-203ENST00000551316 RASSF8Q8NHQ8 419 aa13.76□□□□□ -0.21
SNRPF-203ENST00000551316 FCRL2Q96LA5 508 aaPredicted RBP13.76□□□□□ -0.21
SNRPF-203ENST00000551316 TRIM55Q9BYV6 548 aa13.76□□□□□ -0.21
SNRPF-203ENST00000551316 B3GNT4Q9C0J1 378 aa13.76□□□□□ -0.21
SNRPF-203ENST00000551316 APOBEC3GQ9HC16 384 aaKnown RBP13.76□□□□□ -0.21
SNRPF-203ENST00000551316 AGPAT3Q9NRZ7 376 aa13.76□□□□□ -0.21
SNRPF-203ENST00000551316 PILRAQ9UKJ1 303 aa13.76□□□□□ -0.21
SNRPF-203ENST00000551316 ENTPD4Q9Y227 616 aa13.76□□□□□ -0.21
SNRPF-203ENST00000551316 MKRN2OSH3BPM6 223 aa13.75□□□□□ -0.21
SNRPF-203ENST00000551316 IRAK2O43187 625 aa13.75□□□□□ -0.21
SNRPF-203ENST00000551316 SLC26A4O43511 780 aa13.75□□□□□ -0.21
SNRPF-203ENST00000551316 STX6O43752 255 aa13.75□□□□□ -0.21
SNRPF-203ENST00000551316 ATP9BO43861 1147 aa13.75□□□□□ -0.21
SNRPF-203ENST00000551316 ZBED1O96006 694 aa13.75□□□□□ -0.21
SNRPF-203ENST00000551316 CD58P19256 250 aa13.75□□□□□ -0.21
SNRPF-203ENST00000551316 IRAK1P51617 712 aa13.75□□□□□ -0.21
SNRPF-203ENST00000551316 DLG4P78352 724 aa13.75□□□□□ -0.21
SNRPF-203ENST00000551316 SEPT6Q14141 434 aa13.75□□□□□ -0.21
SNRPF-203ENST00000551316 DLG2Q15700 870 aa13.75□□□□□ -0.21
SNRPF-203ENST00000551316 ZXDCQ2QGD7 858 aaPredicted RBP13.75□□□□□ -0.21
SNRPF-203ENST00000551316 MAP9Q49MG5 647 aa13.75□□□□□ -0.21
SNRPF-203ENST00000551316 BSPRYQ5W0U4 402 aa13.75□□□□□ -0.21
SNRPF-203ENST00000551316 ARL6IP4Q66PJ3 421 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms